| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0107 |
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| Symbol | |
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| ID | 5131708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 107082 |
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| End bp | 108308 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640529010 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001213576 |
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| Protein GI | 147668758 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA ATTCAAAAGG TGATTCCATT TTGAATAGCC AGATATCACA ATCCCAAGTA
GAAAGTATGC TTTTCCGCTG CTTTGCTGAA GAATTGAATG ACATAGTATG GGAGGGCAGC
AATACTATTG CCGTAACGTT TGTTAATTCA AAAGTATATG ATATTTGGGG ATACAAACCC
GAAGAGTTAA TAGGGAAAAA TTTTCTGGAT TTCATGGTTC CTTCAAAAAG AGAGGAACAA
AAAAAAGTTA TTGATTCCAT GGTAGAAAAT AAAGCTGCTG TTAATGGAAT CCATCTATAT
TATCAACACC GCAATGGTAA AACTCTTATC TTCGAAACTC GGGCAAAGCC TATATTGGAT
AATAACGGGA AATGTGTTGG ACACAGGGGT ATTTTCCGTG ATGTGACCAA CTATATTCTC
CAAGAGAAGA GACTGCAGAA ACTTTATAAA CAAGAAAAAG CTGCCTTTAC TGAATTAGAA
AATCAAATGC AACAGCGCTT AGAATTTACC AGAGCTCTGG CACATGAACT TAAAACACCG
TTGACAGTTA TTCAGGCTGC AAATGAACTT ATGGGTACAC AAATATTGAG CCCTGAGTTG
ACAAATATAA GCGACAGCAT CGCAAGAGGT GTTCAAAGCC TCCAAAAAAG AGTAAATGAA
TTGCTCGATC TCGCCAAGGG TGAGGTAGGT ATACTCACCG TAAACAGAAA ATTGATTAAA
ACATTACCTT ATATCACCAA CCTTATAAAT GACTTAAAAC CTATGGTAAA AATGAGAAAC
CGAAACTTGT TAACCAATAT TCCGAATTCT CTTCCCAATA TATGTGCAGA CGAACAAAGA
TTAACCCAAA TAATTTCAAA TCTGGTAGAT AATTCCATTA AATACAGCAC AGAAAAAGCA
GCTATAACTA TTAGTGTGAG ACAAGATACC AACTTGGATA ATATTTTATT CCAAGTTACC
GATACAGGTT TCGGTATACC ACCGGATAAA CAGATAGAGA TTTTTAACCC ATACGCCCGA
ATAAGAAAAG CTGAGGAACA TACCACAGGT CTGGGAATAG GGCTCTCGCT ATCTCGGACA
CTTGTTGAGC TGCATGGCGG GCAAATCTGG TTTGAGACAA GTGAAGGTAT AGGTAGCAGT
TTCTACTTTA CAATGCCGAA ATACGCCCGC AAGCGCATGA TAACTGCTGT TAAGAAGAGG
CAACCGGATG AAAATTGTCA TAATTGA
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| Protein sequence | MSDNSKGDSI LNSQISQSQV ESMLFRCFAE ELNDIVWEGS NTIAVTFVNS KVYDIWGYKP
EELIGKNFLD FMVPSKREEQ KKVIDSMVEN KAAVNGIHLY YQHRNGKTLI FETRAKPILD
NNGKCVGHRG IFRDVTNYIL QEKRLQKLYK QEKAAFTELE NQMQQRLEFT RALAHELKTP
LTVIQAANEL MGTQILSPEL TNISDSIARG VQSLQKRVNE LLDLAKGEVG ILTVNRKLIK
TLPYITNLIN DLKPMVKMRN RNLLTNIPNS LPNICADEQR LTQIISNLVD NSIKYSTEKA
AITISVRQDT NLDNILFQVT DTGFGIPPDK QIEIFNPYAR IRKAEEHTTG LGIGLSLSRT
LVELHGGQIW FETSEGIGSS FYFTMPKYAR KRMITAVKKR QPDENCHN
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