Gene Fjoh_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_5019 
Symbol 
ID5092163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp6057952 
End bp6058359 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content33% 
IMG OID644744444 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001197337 
Protein GI146302746 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0401266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAG GTAAATTTGC CATAACGATT CACATTCTTA CTCTGCTCAA TAAATTTCCG 
AATGATTATT TATCATCTGA GTTTATTGCC GGAAGTATTA ATTTAAATCC GGTTTTGGTT
CGAAAAGAAA TTGCCAACCT AAAAGCACAT CATATTGTAG AAAGTAAAGA AGGAAAAAAT
GGCGGAACGA AACTGGCCGT TGATTCTTCT AAACTGACTT TAAAAGAGAT TTTTGAAATG
ACTTTTGAGA CCATTGGTTT AGGTTATGCT AAAAATCAGC CTAATCCGGA TTGTCCTGTT
GGAAAAAATA TTAATCAGCA TCTGGCGAAT TTATATGCTG ATATGAATGA GAAAGTGAGC
GCACAATTAG AAGGAATTTC TTTAGAGGAT TTTTCGAACC AATTTTAA
 
Protein sequence
MLSGKFAITI HILTLLNKFP NDYLSSEFIA GSINLNPVLV RKEIANLKAH HIVESKEGKN 
GGTKLAVDSS KLTLKEIFEM TFETIGLGYA KNQPNPDCPV GKNINQHLAN LYADMNEKVS
AQLEGISLED FSNQF