Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_5018 |
Symbol | |
ID | 5092162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 6056812 |
End bp | 6057723 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644744443 |
Product | auxin efflux carrier |
Protein accession | YP_001197336 |
Protein GI | 146302745 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.320746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACT TTATTATAAT ATTCTTCTTT TTGTTTTTAG GATTGCTTTT GCAAAATGTA AAGCGGTTTC CAACTCATAT TTATAAAACA ATTAATAAAA TTGTCATTTA CATCTGCCTT CCGGCGATTA CTTTATATCA TATTCCGAAA ATAAAATGGA GCAACGAATT GCTGTTTCCA ATAGGAGCGG GGTGGATTAG TTTTTTTCTG GCTTTTGTAT TTTTTCATTT TTTAGGAAGA AGGCTGGGCT GGTCTAATAA ATTAATAGGA TGCTTAGTTT TAACAGCCGG ATTAAGTAAT TCCTCCTTTT TGGGTTATCC AATTGTAGAA GCTTTATTTG GAAAAAAAGG TTTAGAAACT GCTGTTCTGG TAGATCAGCC GGGAACTTTT GTGGTGGTTT CGACTTTAGG AGTTTTTGTA GCGGCTTTTT ATTCAAAAGG AAGTCCTGAT TTTAAAAGTA TAGCGAAAAA GATAATTCTA TTTCCGCCTT TTATTACGTT TGTTGTTTCG TGTTTATTAA ATGTTTTAGA TTACGATTTA GATCTCAATA TACAGTCTTT ATTATTAAAA TTAGGAAGTC TGGTTACGCC TTTGGCTTTG TTTTCGGTTG GGCTGCAGCT GACTTTTGAC CGAAAAAGCA AACATTGGAA ATTCTTAAGA CTCGGACTTT TCTTTAGACT GATCGTAACA CCGCTTATCA TTTTTATTCT GTATGTTTTT ATTTTCAACC AGCATTCTGA AGCTATAAAA ATTACGATTA TTGAAATTGC AATGGCACCC ATGATTACAG GTGCAATTCT CGCTTCTACC TATGGCTTAA AACCAAAATT AAGCAGTATG ATGATTGGTT TTGGAATTCC TATTTCGTTT GTAACCCTTG CCATCTGGTA CTTTGTAGTT GGCTTTATTT AA
|
Protein sequence | MNNFIIIFFF LFLGLLLQNV KRFPTHIYKT INKIVIYICL PAITLYHIPK IKWSNELLFP IGAGWISFFL AFVFFHFLGR RLGWSNKLIG CLVLTAGLSN SSFLGYPIVE ALFGKKGLET AVLVDQPGTF VVVSTLGVFV AAFYSKGSPD FKSIAKKIIL FPPFITFVVS CLLNVLDYDL DLNIQSLLLK LGSLVTPLAL FSVGLQLTFD RKSKHWKFLR LGLFFRLIVT PLIIFILYVF IFNQHSEAIK ITIIEIAMAP MITGAILAST YGLKPKLSSM MIGFGIPISF VTLAIWYFVV GFI
|
| |