| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4718 |
|---|
| Symbol | |
|---|
| ID | 5092416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5697412 |
|---|
| End bp | 5698482 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644744140 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_001197036 |
|---|
| Protein GI | 146302445 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAT TTTTCTTAAA ATTTAAAAAT CATAAAGAAC AAAATTTACC TTTTGTACTT
TATTCAAAAC CCAATTCTGG AAATCTTATT GGTTTTTTAC AGCAAAATGA TACTTTACAT
CAAGTTGCAG ATTATACAGA GAAAGGATTT GTTTTTGCTT CTTTTGATGA AAAACAGCTT
GTTTTAATTC CGGAGAACGA ATCGGAAATT ATTACTTCAC AAAAAGAAAT CACTGCATTT
GAATCTTTTG AAACAGATGA TTTAAATTTA GATGCTGCAG CTAAAACGCA ATACGAAAGT
TTAGTTGCAA AAGGCGTTGA GGCTATTAAA AATGAAGAGT TTAAAAAAGT AGTTTTATCA
AGAAGCGAAA AAGTCAATTT AGCTGAATTT GATTTTATTG AAACCTTTCA GCATTTGATT
CAAATTTATC CTGCTACTTT CTGTTATTGC TTTTTTCATC CAAAAGTTGG ATTTTGGATG
GGAGCAACGC CTGAAAAACT TTTAAAAGCA AACGGAAATG TTTTTGAAAC CATGGCTTTG
GCCGGAACAC AAAAAGATAA TTCTGAAACT GAAATAGTCT GGCAGCAAAA AGAAAAAGAC
GAACAGCAGT TTGTAACTGA TTTTATTGTA AAAAGACTGA GAGAATTTAC GGCTTCGGTT
GTAGTTTCTG AACCGTACAG TTTAAAAGCA GGTTCTATCT GGCATATTAA AACGGATATT
TCGGGAGTTT TAAAGGAGAA TTCAACTTTA GAAGAAGTTA TTGATACGCT TCATCCAACT
CCTGCTGTGT GCGGACTTCC AAAGAAAAAA GCAAAAGCAT TTATTATCGA AAACGAGAAT
TACGATAGAA CTTTTTATAC CGGATTTCTG GGTGAATTAA ACAGCAGTTT TACTGGAAAT
ACTGTTAGTT CTGATTTATT CGTAAATTTA CGAAGCATGC AGATTCTGGA TAAAACAGCC
ATTTTATACA TGGGATGCGG CATAACTAAA GAAAGTATTC CCGAAAAAGA ATGGGAGGAA
AGCGTCAATA AATCGATGAC GATGAAAAGA GTATTGAGAG TTATGAGTTA G
|
|---|
| Protein sequence | MNPFFLKFKN HKEQNLPFVL YSKPNSGNLI GFLQQNDTLH QVADYTEKGF VFASFDEKQL
VLIPENESEI ITSQKEITAF ESFETDDLNL DAAAKTQYES LVAKGVEAIK NEEFKKVVLS
RSEKVNLAEF DFIETFQHLI QIYPATFCYC FFHPKVGFWM GATPEKLLKA NGNVFETMAL
AGTQKDNSET EIVWQQKEKD EQQFVTDFIV KRLREFTASV VVSEPYSLKA GSIWHIKTDI
SGVLKENSTL EEVIDTLHPT PAVCGLPKKK AKAFIIENEN YDRTFYTGFL GELNSSFTGN
TVSSDLFVNL RSMQILDKTA ILYMGCGITK ESIPEKEWEE SVNKSMTMKR VLRVMS
|
|---|
| |