| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4712 |
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| Symbol | |
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| ID | 5092410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5688195 |
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| End bp | 5688884 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644744133 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001197030 |
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| Protein GI | 146302439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC TTTCAGATAA AAATAACCTG CAAATACTTC ACGAAGACAA TCACATTATT
GTGGTTAATA AGCGTGTTGG CGATATTGTA CAAGGTGATA AAACGGGTGA TAAACCTTTA
TCTGATATTG TAAAAGAATA CATAAAAGAC AAATACAATA AACCCGGCGA TGTTTTTCTG
GGTGTAATTC ATCGTTTAGA TCGTCCTACA ACCGGAATTG TGGTTTTTGC GAGAACCAGC
AAAGCATTAT CACGAATGAA TGAATTGTTC AGCAATCGTG AAACTAAAAA AACATATTGG
GCTGTTGTAA AAAATAAACC TGTAGAAGCT GCTGCCAAAC TGGTTCATTA TTTAAAAAGA
AACGAAAAAA ACAATACTTC AAAAGCGCAT TTAAAAGAAG TTCCAGACAG CAAACTGGCA
AGTCTGGATT ATAAAATCAT CAAAGAACTT CAAAATTATA CGGCTCTTGA AATCAATCTT
CATACAGGAC GTCATCATCA AATTAGAGCG CAATTATCGG CAATTGGTTC TCCAATAAAA
GGCGATTTAA AGTATGGTGC AGACCGAAGC AATCCAGACG GAGGTATTCA TCTTCATGCG
AGAAAACTAG TTTTTGTTCA TCCGGTTTCA AAAGAAAATA TCACAATTAT TGCCCCGGTT
CCAGACGAAA CTATTTGGAA TGCGGTATGA
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| Protein sequence | MKILSDKNNL QILHEDNHII VVNKRVGDIV QGDKTGDKPL SDIVKEYIKD KYNKPGDVFL
GVIHRLDRPT TGIVVFARTS KALSRMNELF SNRETKKTYW AVVKNKPVEA AAKLVHYLKR
NEKNNTSKAH LKEVPDSKLA SLDYKIIKEL QNYTALEINL HTGRHHQIRA QLSAIGSPIK
GDLKYGADRS NPDGGIHLHA RKLVFVHPVS KENITIIAPV PDETIWNAV
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