Gene Fjoh_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4390 
Symbol 
ID5093908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5295339 
End bp5296169 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content35% 
IMG OID644743814 
Producttranscriptional regulator-like protein 
Protein accessionYP_001196716 
Protein GI146302125 
COG category[K] Transcription 
COG ID[COG5340] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACTA TGAGGCATAA ATATATTTCT ACACAATCTA ATGAGATCCT TTCCTATTTC 
AATAGTAAGG ATATGCTGTG TTTTGATTCT AAAGCAGCAT TAAAAGCTTT GCCTGAATCA
AAAGAAAGCG CGGTAAGGGA ATTGCTTAGC GACATGACCA AAAGAGGGTT GTTAATGAGG
CTAAAAGAGG GTATTTATTG TATAATACCC TATGAAGAAA ACCCGGAAAC TTTTATGCCT
GACTGGCACT TAATCGCACA ATACCTCGTG AAAGATGCGA AGTATTACAT TGGCTACTAC
TCTGCCCTGC AAATCCACAA CCTCATTACT CAACCTTCCC TTAAAGAGCA GATTGTTGTT
TCAAAACAAA TGAGGCCATC GGAAATTAAA ATCAAAGACA TCACATTTCA ATTTATCTAT
CACAATGAAA ACCATTTCTT CGGTGAAAAG AAAATTTGGA TTGATGATTT TAATAAAGTG
CTGTGTTCTG ATTTAGAAAA AACTATAGTG GATTGTTTGT TCAAGCCGGA CTATGCGGGA
GGAATCGTCG AAATTGCTAG AGCAATACAC GAAACGAGAG ACAAAATTAA CTTTAAAAAA
CTCTTAGATT ATACCGAAAA ATTTAAATCC CAAGCAGTTT TAAAACGACT GGGATTTCTC
TTGGAAATGC TTGAAATTGA CAATGAAATT GTTCCAGAGC TGTTGATTAT GAAAACAGCC
TCTTACGTAC AGCTTGATAC GGAATTGCCA AAATCGGGTA AAATGATAAG TCGTTGGAGT
ATTCAACAAA ATTTAGAAAC AGAAACAATT AAGTCAGCCA TTTACACATG A
 
Protein sequence
MLTMRHKYIS TQSNEILSYF NSKDMLCFDS KAALKALPES KESAVRELLS DMTKRGLLMR 
LKEGIYCIIP YEENPETFMP DWHLIAQYLV KDAKYYIGYY SALQIHNLIT QPSLKEQIVV
SKQMRPSEIK IKDITFQFIY HNENHFFGEK KIWIDDFNKV LCSDLEKTIV DCLFKPDYAG
GIVEIARAIH ETRDKINFKK LLDYTEKFKS QAVLKRLGFL LEMLEIDNEI VPELLIMKTA
SYVQLDTELP KSGKMISRWS IQQNLETETI KSAIYT