Gene Fjoh_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4290 
Symbol 
ID5090626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5182819 
End bp5183367 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content38% 
IMG OID644743714 
ProductPfpI family intracellular peptidase 
Protein accessionYP_001196617 
Protein GI146302026 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.266968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ATATAGCAAT ATTAGCCACA AACGGTTTTG AAGAATCAGA ATTAGCATCA 
CCTAAAGCCT ATCTTGAAGA GCAAGGCTGG AATGCAGATA TCGTCAGTTT GAAATCTGGA
ACTATCAAAT CTTGGAAAGA CGGAAATTGG AGCAAAGAAT ATAATGTTGA TGTCGTATTA
GATCAGGCAA ATGAAGCAGA TTACGATGCT TTGGTTCTGC CGGGAGGAGT TATAAACCCT
GATTTATTGA GAAGAGAAGA AACTGCAGTA AATTTTGTAC GTTCTTTTTT TGAAAGTAAA
AAACCTGTAG CCGCTATTTG TCACGGACCT CAAATTCTGG TAGATGCCGA TGTTTTAGAA
GGTCGAAAAG TAACTTCGTT CTTTTCTGTT AAAAACGATT TGAAAAATGC CGGAGCACAA
TGGGAAGATT CAGAAGTTGT CGTAGACAAT GGATTAGTGA CCAGCCGAAA CCCAAATGAT
TTACCCGCTT TTAATAAAAA AATGGTGGAA GAAATTAAAG AGGGAATACA CGAACGCCAG
AGAGTCTAA
 
Protein sequence
MKKNIAILAT NGFEESELAS PKAYLEEQGW NADIVSLKSG TIKSWKDGNW SKEYNVDVVL 
DQANEADYDA LVLPGGVINP DLLRREETAV NFVRSFFESK KPVAAICHGP QILVDADVLE
GRKVTSFFSV KNDLKNAGAQ WEDSEVVVDN GLVTSRNPND LPAFNKKMVE EIKEGIHERQ
RV