| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4195 |
|---|
| Symbol | |
|---|
| ID | 5093825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5042062 |
|---|
| End bp | 5043582 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644743614 |
|---|
| Product | RagB/SusD domain-containing protein |
|---|
| Protein accession | YP_001196522 |
|---|
| Protein GI | 146301931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATATAGCTTT TCTTTGCTTC GGAACACTCG CTTTTTTCAG CTGTTCTGAT
CTGGAAGAAA AACCGGTAGG AATTATTCGT CCGGCGAACT TCTTTAACAA TACAGACGAT
TTGCAGGCCG CTGTAAATGG TGCTTTTGCA AACATTGCCC ATAATAATTA CTGGGGAAGA
GAATTTACAA TTGCTTTAAT GCTTCGCGAT GACATGGCCG ATATTGGCGA CAGAACAACT
CAGGCTGCGC GTATCGATGT AAACGATATG TCTATGAATG ATACCAACGC GCTTGTAGCA
AACTTTTGGC CGCAATCGTA TGTTATCATT ACAGCCGCTA ATCAGGCAAT TGAAGGTGCT
AAAAAAACAC CGGGAGATCC TGCAAAAGTT AACGCAATTG TAGCTCAGGC TTATTTTGCA
AGAGCATTTA CATATTATCA TTTAGTGCGT CTTTTTGGAG ACATTCCCTA CATTGATTTT
GTCGTAAACG ATGTTTCTCA GATCAATTCT ATGAGCAAAA CCAAAGAAGC AGATGTATAT
CCAAAAATCA TTGCCGATTT AGAATTTGCA AAACAATGGC TTGAAGATAA ACCAAAAGTA
AAAGCTGTTC CGGGTAAAGG CACCGCGGCT GGATATTTAG CATCTGTTTA CCTGACTTTA
GGAAATTTCC AGAAAGCATA CGACGAAGCT AAATATGTAA TTACAAACGA AACAAAATTT
GGTTTAGGTT TAGATGCTGA TTTTCAGGAT TTATTTAACG CTACAAAAAC GGCATCTTTA
AAAGAACCGC TTTTTACAGT TGATTTTAAC AACTTAACAT CAGGAAATTA CGGCCAGGAT
TATACCGCGT TTTTTACAGG ATCTTTAAAA GATGACAGTT ATAGTTACGG GCAAGGATTC
TCGGTTGCAG TTCCTTCCTT AAAAGTATTT AATACCTGGG ATCAAAGAGA TTACAGAAGA
GCAGTAAGTT TTGATACCAT TATTAGAAAG AAAACTGGTC CGGGCGGTGC TTTACAGGTT
TATCCTTCAA GCGACAACGA AAAAGCGCCG CGTCCGCATA TTGCCAAATA TTTCCGTTTT
CCGGGAAAAG CAGGTGCTAA CGGAAGAACT TCTCAGCACA ACTACATTAC AATGCGTTTT
GCCGAAGTTT TATTAACAGC TGCAGAAGCA TTAAACGAAA TCACTCCGGG AACTACAGAA
GCAGATGGTT ATGTAAACCG TGTTCGTGCC AGAGCCAGAA ACAAAGCTGG AAAACTGGTT
TCTTTTCCGG CAAACGTAAC TCCGGGACTT TCTCAGGCCG ATTTTAGAAA AATGGTTATT
GACGAAAGAA GATTAGAACT GGCATTTGAA TATGTAAGAT GGTACGATAT TAAAAGACTT
AAAATTGGTT TAGAAGTTTT TGGTCCGTCT GGTTTAGAAC CGCACGCTAA TTTCGATCCA
AACAAAGATT ATTTATGGCC GTTACCAGGA ACAGAATTGG CTATTAACCC AAATTTAAAA
CCAAATAATC CTGGTTATTA A
|
|---|
| Protein sequence | MKKYIAFLCF GTLAFFSCSD LEEKPVGIIR PANFFNNTDD LQAAVNGAFA NIAHNNYWGR
EFTIALMLRD DMADIGDRTT QAARIDVNDM SMNDTNALVA NFWPQSYVII TAANQAIEGA
KKTPGDPAKV NAIVAQAYFA RAFTYYHLVR LFGDIPYIDF VVNDVSQINS MSKTKEADVY
PKIIADLEFA KQWLEDKPKV KAVPGKGTAA GYLASVYLTL GNFQKAYDEA KYVITNETKF
GLGLDADFQD LFNATKTASL KEPLFTVDFN NLTSGNYGQD YTAFFTGSLK DDSYSYGQGF
SVAVPSLKVF NTWDQRDYRR AVSFDTIIRK KTGPGGALQV YPSSDNEKAP RPHIAKYFRF
PGKAGANGRT SQHNYITMRF AEVLLTAAEA LNEITPGTTE ADGYVNRVRA RARNKAGKLV
SFPANVTPGL SQADFRKMVI DERRLELAFE YVRWYDIKRL KIGLEVFGPS GLEPHANFDP
NKDYLWPLPG TELAINPNLK PNNPGY
|
|---|
| |