| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4075 |
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| Symbol | |
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| ID | 5090801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4868404 |
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| End bp | 4871931 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644743494 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196402 |
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| Protein GI | 146301811 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.589786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAA TAGTTTTTTT TATTTTTTGT TTTTTTTCAA GTCTTTGCTT TGTTTGGAGT
CAGAGCAAAG ATTCGGGGAA GTTTCGTAAA GAAATCTCGC TGAATTCATC TTGGGAAACC
GTAATACTGG ATAATCTTCC GCTGAAAGAA GAAGATTTTG TAGAAAATCC AAAAACTGAT
TCCAATTGGC AAAAGGTTAG TGTGCCTCAC AATTGGGATC AGTATTATGG TTTCAGAAGA
ACAAAACATG GGAATTTACA TGGTACCGCC TGGTACAAAA AAACACTAAA ACTCGATAAG
AAAGACAGTT CAAAACAGCA CTTTCTTTAT TTTGAAGGGG TAAGTTCGTA TGCAACCGTT
TGGATAAATG GTAAAAAAGT GGGCGAACAC AAAGGCGGAA GAACTACTTT CACCTTAGAC
ATTACAAAAG CGGTTTCTTT CGACAAAGAA AATATCATTG TAGTTAAAGC AGCACATCCC
TCTTTTATTG CAGATCTTCC TTGGGTTTGC GGAGGTTGTT CAGGAGAATG GGGATTTTCT
GAAGGTTCTC AGCCAATGGG AATTTTTAGG CCAGTTTCTT TGGTAATTAC AAACAATGTT
AGAATTCAGC CGTTTGGTGT TCATATCTGG AACGATAAAT CGGTTTCTAA ACAAAAAGCG
ATTCTTCATA CCACTACAGA AATCAAGAAT TACGGCACTT CACAACGCAA CTTAACTATC
GAAAATATCT TTTTGGATGC TTCAGGAAAG AAAGTTGCTA TCAATAAAAG CGATAACAAA
ATCAATTCGG GAGAAACAAA GGAAATAGCA CAAACGCTTC CTGAGATTCA GAATCCGAAA
TTATGGTCGC CATCCAATCC GTATTTGTAT AAATTGGTGA CTTCAATTTA TGAAAACGGA
AAAATAATCG ATCAGTTAGC AACGCCTTAC GGAATTCGCT GGGTAAGTTG GCCAGTTAGC
CGTGACGGAA AAGACAATCG TTTTTTCATA AATGATGAAC CTGTTTTTAT AAACGGCGTT
TGCGAATACG AACATTTGAT TGGAAAAAGT CATTCGTTTT CAGATGAAAT GATTCATTCC
AGAATTGAAC AAATCAAAGC AGGCGGATTT AATGCTTTTA GAGAAGCGCA TCAGCCTCAT
AATTTATTAT ATCAAAAAGA ATTAGACGAA AACGGTATTC TGTTTTGGAG TCAGTTTTCA
GCACATATTT GGTACGATAC GCCAGAATTT AAAGAAAACT TCAAAACCTT ATTACGAGAA
TGGATTAAAG AACGCAGAAA CAGTCCATCT GTAGTAATGT GGGGATTGCA GAATGAAAGC
ACCATTCCGA AGGAATTTGC CGAAGAATGT ACACAGATTA TCCGTGAAAT GGATCCGTTA
TCAGCGTCAC AGCGCATTGT AACAACTTGT AATGGTGGAG AAGGAACAGA TTGGAATGTT
GTTCAAAATT GGTCAGGAAC GTATGGCGGA GATCCGTTAA AATACCATCT GGAAATGACG
ACTCAGCTTC TAAACGGAGA ATATGGCGCA TGGCGTTCAG CCGATTTGCA TACAGAAGGG
GAATTTGACC AAAAAGGAAC TTTGAGCGAA AACCGTTTTT CTCAATTAAT GGAAATTAAA
GTTAGAGAAG CCGAATCGGT AAAAGATAAA ATTGCGGGAC AGTTTAACTG GCTTTTTGCT
TCCCACGAAA ATCCGGGACG AGTGCAAAAC GGAGAAGGTT TTAGAGATAT TGACAAAGTC
GGACCAGTAA ATTACAAAGG ACTTTTTACC ATTTGGGGCG AGCCTTTGGA TGCATTTTAC
ATGTATCGCG CCAATTATGT TTCAAACAAA ACCAATCCGA TGGTTTATAT TGTTTCGCAT
ACTTGGCCAA GCCGTTGGGA AAAACCGGGA ATCAAAAACG GAATCGATAT TTATTCGAAT
TGTGATGAAG TAGAATTGTT TAATGATGTT AATAAAACTT CACTTGGAAA ACTAAAAAAT
CCAGGAATCG GACAGCATTT TCAGTTCAAT AATGTCAATA TTCAATACAA TGTTTTATAT
GCCGTTGGTT ACGTAAATGG GAAAGCGGTT GCTAAAGATT ATATCGTTTT AAATAATTTT
CCAAAAGCAC CAAGTTTTGA TGCTTTAACG TCTGAGAAAA CAGATATAAC AAAAGCCCAA
AAAAGTTATA ATTACATTTA TAGAGTAAAT TGCGGAGGTT CTGAATTAAC AGATTCTGCT
GGAAATACTT GGTTAACCGA TACACACAAA AACGGTCAAA ATACTTGGGG TTCGTTATCG
TGGACAGATA ATTTTGAAAA ATTGCCAGAC TTTTTTGCCA GTCAAAGAAC AACTTTCGAT
CCAATAAACG GTACGAAAGA TCCTGAGTTA TTTCAAAGTT TTAGATATGG AGTTGATAAA
CTACGTTACG AATTTCCAGC TCCAGATGGC GAATATTTAG TCGAATTATA TTTTACAGAA
CCTTGGTACG GAACTGGCGG AGGCTTAGAC TGCAAAGGCT GGCGATTGTT TGACGTTGCC
ATCAACGATA ATGTTGTTTT AAAAGATTTC GATATTTGGG CAGAAGCTGG ACATGATAAC
GCTTTGAAAA AGACCTTTAA AGTAAAAAGT ACAAACGGAA AAATTGTTAT TTCCTTCCCA
AATGTAAAAG CTTCACAAGC GATTATTTCT GCCATTGCGA TTGCAACAAA AGACATTCAT
GCAAGACCTG CGTTAGAATC TTCAAAAAAC ATTCAGAATC TGGTTTTAGA TTCTTATGAT
AAAACGAATA GAGTAGCTTC ATGGCTAGAT ATTAATTCAA AACAATATTC AGATTCTGAT
GTTATTTTTA CCGAATTGCC TTCTGAGGTT TTTGGAGCAG ATTATTTACA GTTTTCAGTT
AATCCAAAAA ACAAAGGATC ATTTATAGCT AAAGAAGAAT CGACAATTTA TGTTTTAGTT
GATAGTAAAA TCAAAACATT AAACGGACTT TCAGATTATA AGAAAATAGA AGAGAAAGCG
AAGAATAGCA ACGGAATTTC ATTTGATGTT TTCACTAAAA AAGTAAAGAA AGGCGAGAAA
GTTCTTTTTG ATAATTCTGA AACAATATCT TCGATTGCAG TCGTTCCAAC GTACGATATG
GGCGAAAAAG ACGATTCAAG ACCAGTTGTA GTCATAGAAG CCGAAAAAAC AAAAACAACA
GGAACAGGAA TCGAAAAAGG AAATTTCAAA AAAGCCGATT ATATTGAGTT CACAAAAAAG
ACAAACAATA GCATCGAGTT TGAAGTAAAA CCTGGTGTTG CCGGAATTTA TTTAATGCGT
TTCCGTTTTA TGAATAGAAA TGAAACGCCA TTAAAAGTCA AATTCAAAAT GGAGGATGCC
TACGGGATTT TAATGCGAAA CGATACAATT GAATTTTTCC CTTCGCCTGA AAAATGGAAG
ATTTTAAATA CGACTTCTGG TGGTTATATT AATGCAGGAA CGTATAAAAT AACGATTGAA
GGTGATGATT TGAAGGGGTT GATGTTGGAT AATTTTGAGT TTCAATAG
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| Protein sequence | MNRIVFFIFC FFSSLCFVWS QSKDSGKFRK EISLNSSWET VILDNLPLKE EDFVENPKTD
SNWQKVSVPH NWDQYYGFRR TKHGNLHGTA WYKKTLKLDK KDSSKQHFLY FEGVSSYATV
WINGKKVGEH KGGRTTFTLD ITKAVSFDKE NIIVVKAAHP SFIADLPWVC GGCSGEWGFS
EGSQPMGIFR PVSLVITNNV RIQPFGVHIW NDKSVSKQKA ILHTTTEIKN YGTSQRNLTI
ENIFLDASGK KVAINKSDNK INSGETKEIA QTLPEIQNPK LWSPSNPYLY KLVTSIYENG
KIIDQLATPY GIRWVSWPVS RDGKDNRFFI NDEPVFINGV CEYEHLIGKS HSFSDEMIHS
RIEQIKAGGF NAFREAHQPH NLLYQKELDE NGILFWSQFS AHIWYDTPEF KENFKTLLRE
WIKERRNSPS VVMWGLQNES TIPKEFAEEC TQIIREMDPL SASQRIVTTC NGGEGTDWNV
VQNWSGTYGG DPLKYHLEMT TQLLNGEYGA WRSADLHTEG EFDQKGTLSE NRFSQLMEIK
VREAESVKDK IAGQFNWLFA SHENPGRVQN GEGFRDIDKV GPVNYKGLFT IWGEPLDAFY
MYRANYVSNK TNPMVYIVSH TWPSRWEKPG IKNGIDIYSN CDEVELFNDV NKTSLGKLKN
PGIGQHFQFN NVNIQYNVLY AVGYVNGKAV AKDYIVLNNF PKAPSFDALT SEKTDITKAQ
KSYNYIYRVN CGGSELTDSA GNTWLTDTHK NGQNTWGSLS WTDNFEKLPD FFASQRTTFD
PINGTKDPEL FQSFRYGVDK LRYEFPAPDG EYLVELYFTE PWYGTGGGLD CKGWRLFDVA
INDNVVLKDF DIWAEAGHDN ALKKTFKVKS TNGKIVISFP NVKASQAIIS AIAIATKDIH
ARPALESSKN IQNLVLDSYD KTNRVASWLD INSKQYSDSD VIFTELPSEV FGADYLQFSV
NPKNKGSFIA KEESTIYVLV DSKIKTLNGL SDYKKIEEKA KNSNGISFDV FTKKVKKGEK
VLFDNSETIS SIAVVPTYDM GEKDDSRPVV VIEAEKTKTT GTGIEKGNFK KADYIEFTKK
TNNSIEFEVK PGVAGIYLMR FRFMNRNETP LKVKFKMEDA YGILMRNDTI EFFPSPEKWK
ILNTTSGGYI NAGTYKITIE GDDLKGLMLD NFEFQ
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