| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3956 |
|---|
| Symbol | |
|---|
| ID | 5089909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4726863 |
|---|
| End bp | 4727252 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644743377 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001196285 |
|---|
| Protein GI | 146301694 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GAATCATAAA TCCGTGGGAA TGGCAAAACG AACGCAGTTA TGTACAAGCC
GTAGAAGTTA AAAATCCGCA GGGAACATTA TACGTTTCCG GACAAACCGC CATAAGTGCA
GACGGAATTT CGAGTAATGA AGATATGGAA TCACAGTTAA AACTTGCCAT AAAAAACCTC
GAACAAGTAA TAACAGAAGC CGGTTATGAA TGCAGCGGTA TTGTGAGATT GAATATTTAC
ACTACAGCAA CTCATGAACT GTGGCCTCAT TTTTCTATTA TTCAGGATTG GGCAGCGAAG
CATAATATTA AACAAGCCAC AACTTTAATG GAAGTAAAAA GCCTTTTTGA AACCTTAAAA
GTAGAACTTG AAGCTACGGT TGTTAAATAA
|
|---|
| Protein sequence | MEKRIINPWE WQNERSYVQA VEVKNPQGTL YVSGQTAISA DGISSNEDME SQLKLAIKNL
EQVITEAGYE CSGIVRLNIY TTATHELWPH FSIIQDWAAK HNIKQATTLM EVKSLFETLK
VELEATVVK
|
|---|
| |