| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3901 |
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| Symbol | |
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| ID | 5090132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4646938 |
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| End bp | 4649142 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644743323 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001196231 |
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| Protein GI | 146301640 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.707047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT TATTTTTACT TTTCATTTTT ATTCTTTCTT TTTCAACAAA TGCGCAATCT
GTAAGCGGGA TTGTAAATAA TACCGACGGA AAACCTTTAT CAGATGTTTT AATTCGGGAT
TTGATTTCTA AAACACACGC TCATACTGAT ATAAACGGAA AATTTACATT AGAACAAACC
AAAACAAATG ACAGCCTTCA AATTTCTAAA CAAGGTTATA TTACACAAAA AATAAAACTG
TCTTCAGATG CTTTTCTTTC TATTCAATTA GAAGAAAAAC CTTTTTTATT AGAAGAAGTT
ACCATAACCA ACAGTCTTAA ATATTTAAAT ACTATTTCTA AAATAGATTT AGAGATTCAG
CCTGTTTCAA ATTCGCAGGA TTTACTGCGA AAAGTTCCGG GGCTTTTTAT AGGCCAGCAT
GCGGGCGGGG GAAAAGCAGA ACAAATTTTC CTGAGAGGTT TTGACTGTGA TCACGGAACT
GATATTAATG TTACAGTAGA CGGAATGCCG GTAAATATGG TTTCGCACGC ACACGGACAA
GGTTATGCCG ATCTTCATTT TGTAATTCCT GAAACAGTTG ATAAGATAGA TTTTGACAAA
GGTTCTTATT TTGTTGATAA AGGTGATTTT ACAACAGCCG GATACGTTGG TTTTAATACT
AAAAATGCCT TGCAGAATAG TTCTGTTTCT TTTGAAGGAG GTCAGTTTGA TACTTTTCGC
ACCGTTGCTT TGTTCAATTT ATTGAATAAG GAAAATCAGT CGGCTTATTT TGCAGGCGAA
TATATGATGA CAGACGGATA TTTTGATGCA CCGCAAAACT TCAATCGAAT TAATTTATTT
GGAAAATATT CGGCTAAAAT GACTAATGGC GACCGATTGG CAATTTCGGT TTCGCATTTT
AAAAGCCAAT GGGATGCGAG CGGACAAATT CCGGATCGTG CTGTAAACGA CGGAACAATT
TCTCATTACG GAGCAATCGA TCCAAATGAA GGAGGAAATA CAGGAAGAAC TAATTTTAAT
TTACAGTACG ATGCCAAAAT TGATGAAAAC AGCCAGATTA AAAACACGGC TTATTTAAGC
AAATATGATT TTGAATTGTA TTCGAATTTT ACTTTTTTTC TTAATGATCC TGTAAACGGA
GATCAGATCA AACAAAAAGA AAATAGAACC ATTGTAGGTT TTCAGTCTGA ATACGATCAA
AAACTAAATG AAAAATGGCT TTTTAAATTA GGTGCAGGAC TGCGAAATGA CAATAACAAA
GATGTAGAAT TATCGCATAC CGTAAATCGT AAAACTGTTT TAGAGTATTT GAGTTTAGGA
AATGTAAACC AAACGAATCT TTTTGCTTAT TCAAGCCTTG ATTTTACGTC AGGAAAATGG
TTAGTAAATG GAGGTTTACG TTTGGATTAT TTCAAATTTG GTTACGAAGA CCAATTGGCA
CCAACTTACA GCAATCAAAC GCAGACGAAA GCAATTGTGA GTCCAAAACT GAACTTTTTA
TACACTCAGA ATGATAAAAT AAATTACTTT TTAAAATTAG GAAAAGGGTT TCACAGCAAT
GATACACGTG TAGTAGTGGC TCAAAAAGGA GAAAAAATCC TTCCGGAAAC GTATGGAGCA
GATTTAGGAA TTAACTGGAA ACCTTTTCCA AGAATGATTA TCAATTCCGC TGTTTGGTAT
TTGTATCTGG CGCAGGAATT TGTATATGTG GGAGACGAAG CTGTTGTTGA GCCAAGCGGA
AAAACAGAAC GAAAAGGATT CGATTTTGGT TTTAGATATC AATTAACCAA TTGGTTATTC
TGGAATACTG ATTATACTTA TACACATGCA AGATCAATAG AAGAACCAAA AGGAAATGAT
TATCTGCCAT TGGCTCCGGC TCATACTTTA ATGAATGGAT TTTCTGTAAA AGACCTAAAA
GGATTTTCTG GAAGTTTGAG AACAAGATTT TTGGGAGATC GTCCGGCAAA TGAAGATAAT
TCGGTAGTTG CCAAAGGATA CTGCATCACA GATTTTTCAG TAAACTATCA AATTAAAAAG
GTATCGATAG GACTAAACAT CGATAACATT TTTAATACAA AATGGAAAGA AACGCAATTC
TTAACAGAAT CAAGATTAGC AAATGAAACT GATCCTGTTG AAGAAATTCA TTTTACCGCC
GGAACGCCAT TTAATGCAAG ATTAATTTTA AAATATAGAT GGTAA
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| Protein sequence | MRFLFLLFIF ILSFSTNAQS VSGIVNNTDG KPLSDVLIRD LISKTHAHTD INGKFTLEQT
KTNDSLQISK QGYITQKIKL SSDAFLSIQL EEKPFLLEEV TITNSLKYLN TISKIDLEIQ
PVSNSQDLLR KVPGLFIGQH AGGGKAEQIF LRGFDCDHGT DINVTVDGMP VNMVSHAHGQ
GYADLHFVIP ETVDKIDFDK GSYFVDKGDF TTAGYVGFNT KNALQNSSVS FEGGQFDTFR
TVALFNLLNK ENQSAYFAGE YMMTDGYFDA PQNFNRINLF GKYSAKMTNG DRLAISVSHF
KSQWDASGQI PDRAVNDGTI SHYGAIDPNE GGNTGRTNFN LQYDAKIDEN SQIKNTAYLS
KYDFELYSNF TFFLNDPVNG DQIKQKENRT IVGFQSEYDQ KLNEKWLFKL GAGLRNDNNK
DVELSHTVNR KTVLEYLSLG NVNQTNLFAY SSLDFTSGKW LVNGGLRLDY FKFGYEDQLA
PTYSNQTQTK AIVSPKLNFL YTQNDKINYF LKLGKGFHSN DTRVVVAQKG EKILPETYGA
DLGINWKPFP RMIINSAVWY LYLAQEFVYV GDEAVVEPSG KTERKGFDFG FRYQLTNWLF
WNTDYTYTHA RSIEEPKGND YLPLAPAHTL MNGFSVKDLK GFSGSLRTRF LGDRPANEDN
SVVAKGYCIT DFSVNYQIKK VSIGLNIDNI FNTKWKETQF LTESRLANET DPVEEIHFTA
GTPFNARLIL KYRW
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