Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3895 |
Symbol | |
ID | 5090126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4640831 |
End bp | 4641679 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644743317 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001196225 |
Protein GI | 146301634 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACG ACTATAAAAA GCATGATTTA TATGGCATGA CATTAATTCA AAAAATTGAA TTAACACCGC CGTTTAAATT TGATTTTCCA ATTACTGAAC AGGCTTGCTT TTTATATGTA AAAGAAGGAG AGATTGATTA TTATATTGAT AATGAAAATG TGAATGTTTC TACAAATTAT TCCTTATTAG TGAATTGTAT GGATTCTGGT AAGCAATTGC ACAATTCAAA TTCCAATAAT AATTGTGAAA TAGTAATTGT AACGTTCTAT CCTAAAATAT TAAAGAAAAT ATACGAAAAG GAACTTCCAT TATTGTTTCA AAGACCTGAA AGTTTAATAT CGAATAAATC AAGTGAAAGA ATAAATAACG ATTTTCTAAT TCAAAAGTAT ATTGAAGGAT TATTGTTTTA TTTTGAAAAT CCGTCTTTAA TCAATGAAGA TATCTTAGTT CTAAAATTAA AAGAAATTAT ACTTTTATTA TCTCAGACAC AAAATTCAGA ATCAATACAG CTGATATTAT CCCAGCTTTT TTCTCCAACG ACTTATAGTT TCAGACAAAT AATCGAAGCA AATTTGTTTT CGCAGCTCAC TATTGAAGAA TTAGCACAAC AGAATAATTT AAGTGTTTCA TCGTTTAAAC GCGAATTTTC AAAAATATAT CACGATACTC CCGCTAATTA CATTAAAACT AAAAAACTTA TGAAAGCGGC AGAGATGCTT CAGGTTTCTG ACCAGCGTAT TACTGAAATA GCTTTTGACT GCGGTTTTAA TGATCTGGCA AATTTTACCA AAAGTTTTAC CAGCAAATAT GGTATCAGTC CCACAAATTA CAGGCAGAAA CTTAAATAG
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Protein sequence | MINDYKKHDL YGMTLIQKIE LTPPFKFDFP ITEQACFLYV KEGEIDYYID NENVNVSTNY SLLVNCMDSG KQLHNSNSNN NCEIVIVTFY PKILKKIYEK ELPLLFQRPE SLISNKSSER INNDFLIQKY IEGLLFYFEN PSLINEDILV LKLKEIILLL SQTQNSESIQ LILSQLFSPT TYSFRQIIEA NLFSQLTIEE LAQQNNLSVS SFKREFSKIY HDTPANYIKT KKLMKAAEML QVSDQRITEI AFDCGFNDLA NFTKSFTSKY GISPTNYRQK LK
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