Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3871 |
Symbol | |
ID | 5093782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4598617 |
End bp | 4601625 |
Gene Length | 3009 bp |
Protein Length | 1002 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743293 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_001196201 |
Protein GI | 146301610 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.929379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTAA AATTAAAATT TGCAATAATT ACATTGCTAA TAATCAGCAG TCATACTATA ATGGCACAGT CTAAGACTAT ACATGGGGTG ATTACAGATC CTTCGGGGTT TCCTCTCCCG GGTGCCGGTG TTAATGTAGA AGGTTCAAAA AACAGCACCT CTACAGATTT TGACGGAAAG TATACTTTAA AAGATGTTAA TCCTACAGAT AAAATTACCT TTTCGTTTGT AGGTTTGATT TCTCAAACAA TTACAGTAGG AACAAGAAGC AATATTGATG TCACACTGGC ATTATCCACA CAAAATTTAA ATGAAGTTAT AGTAGGATAC GGAACGCAAA AAAAAGCTAA AGTAACCGGA GCAATCTCTA CAGTAGGTTC AAAAGATATT GCTGCAGTAC CCATTACAAA TGCAGAATCG GCTTTACAGG GAAGAGCTGC CGGTGTTACT GTTGTAAATG GCGCGCCGGG TTCTAATCCT ACCGTTACCA TTCGTGGTTT GGCTACTATG GGAAATAGTG CTCCTTTATA CGTAATTGAC GGAGTTTTGA CAGGAAACCT TTCGGGACTG AGTCCTAATG ATATTGAATC GATGTCTGTT TTAAAAGATG CTTCAACAAC AGCTTTATAT GGTTCAAAAG CTTTTAATGG AGTAATTATG GTAACCACAA AAAAAGGAAA AAAAGGACCA GGTCAGCTCA CTTTTAGCAC TTACGCCGGT TTTCAAACTA TTACCAAAAG ATATGATGTT TTAAATACAC AGCAATATCT GCAGTATGCT AAAGATCTGG GAAGTGATTT AACAGCAAGA GCAGCTGAAT TTGGAAACAT TAATACCAAC TGGCAGGACA AGATTTTTCA AAGCGGTTTA ATGCAGGATT ATAATTTAAG TTTTTCAAAT GGTACCGAAA CTTCTACAGC CCGTTATTCT GCCGAATATT TAAAGCAGGA AGGAGCCGTT ATTAATACAG GTTTTGAACG TTATTCTTTT AGAGCCAATA ATACACAGGA TATCGGCAGA CTTAAAGTAG GAAGTAATAT TGGAATATCT TTCAGTACAA TCAATCCGGA ACGCAGCTCA GGAGGAAGAA CATTACTTGA ACATGCAATA AAAATGGCGC CTTATTTACC AGTTTACAAC GATGCTAGTT TAGGAGGTTA TCAAGGACCA AGCGCTATTG ACGGCAATGA TGCAGAAAAT CCTGTTCGTG TAGCAAATTT AGGGTATCAA AAAATAAACA ATCTCTCAAT AATAGGAAAT ATCTACGCTG AATTAGAGAT TTTAAAAGGT TTAAAATTTA AATCACAAGT TTCATTGGAT TACTACACAG GTAAAGATCA TACATTCGTA CCGAGCTACG CTGATGGTTC TTACCACAGA CAGGCGTTTT CTACAACAAA TGAAACCAAC TCGCAAGGCC AGACTATTGT TTACGATAAC AGCTTAACAT ACAAAACTAC TTTTGCTGCA AAGCACAATT TAGAAGTTTT AGGTGTTATA ACGAAAATTG ACGGAAAGTC ACAAAATCTG GTAGCAGGAA GCCGTTACAA TATTTCAGAC GAAATTGATC AGCTGCGATA TAATGAAGGA AATTTAAGTT CTGCAAATTA CGTAGAAAAG AATATTGGAT ATATTGCCCG TATCAATTAT GATTATGATG ATAAATACCT GCTGGCTGTT TCCGGACGCC GTGATGCATC TTCTCGTTTT GGAGCTAATA ACCGCTGGGG GAATTTCTAT TCAATAGCGG CAGGATGGAA TATAGCCAAA GAAAGTTTTA TGGAGAATTC TATTTTCAGC ACTTTAAAAC TTAGAGCAAG TACAGGAACA ACCGGAAATG ACAGAATAGA CAATTACCAA TACGCAGCTA CATTGCTTGC TGATTATAAT TACCCAATTG CAGGCGGAAA TGCACCGGGT GTATCTCTGG GAGTTGCTTC AAATCCTGAT TTGAAATGGG AGTCTAAAAA GGATAGAAAC ATAGGTGTAG ATTTTGGTTT GTTTGACGAT CAATTCACAG GATCTTTTGA ATATTTTAAT AATAAAAGCA GTGATATCCT TTTTGCAGTT CCTTTAGCAG CTTCTGTTGG ATCTGCCGGA GGCGGAACTC AAATTCAAAA TATTGCCGAT GTAAAAGTAT CCGGATATGA AATCAGTTTA AGTTACAATG ACAGAAAAGG AGATTTCACA TGGTCTGCTA CAGCTAATTT AGGAACAAGT AAAAATGAAG TAACAAGTTT AGCACCGGGA GTTACCAGTG TATTGGGAGG TCCAACTGCA AGAGCAGGTT TAGAGAACTT TTCTAGACTT GAAGTAGGCC AGCCGTTATT TTACTTTTAT GGTTACCAGA CAAATGGAAT TTATCAAAAC CAGGCAGAAG TAGATGCTGT TTTTGGACCG GGTCAGACAA ATATACAGCC GGGTGATATT AAAATTGTGG ATCGTGACGG AAATAAAGTC ATCAATTCAA ACGACAAAAC GAATATTGGA AATCCATATC CTGATTTTAC GTATGGTTTA AATATTACTG CAGCTTATAA AAAGTTTGAT TTTAACTGTT TCATTACAGG AGTTCAGGGG AATGATATTT ACAATGCCAA TACTTTTGAC TTAAAAGGAA TGAATCGTTT GTTTAATGCC AGTACTGATG TTTTAGACAG AGCAATAGTT GCGAATGGAG TCGTTACAAA TCCATCGGCA ACTCTGCCTA GAGCGCAGGG AGCAGATATT AACTGGTCTT CAGCAAATCA GCGCTATATT GAAGATGGTT CTTATACGAG ATTAAAAAAT ATCACATTAG GATATACCTT ATCAGGAGAA ACATTTGATA ATCATTTTTC AAATATAAGA TTCTATGTAA GCGGTCAAAA CCTTATTACT ATTACGAAGT ATACGGGATT AGATCCTGAA ATTGCACGTG CAGACGGAAA CGCAAATTCT GCAGGTATCG ACTTAGGAAG ATATCCACAG CCTAAATCAG TAATTTTTGG ACTTGATGTT AAATTTTAA
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Protein sequence | MMLKLKFAII TLLIISSHTI MAQSKTIHGV ITDPSGFPLP GAGVNVEGSK NSTSTDFDGK YTLKDVNPTD KITFSFVGLI SQTITVGTRS NIDVTLALST QNLNEVIVGY GTQKKAKVTG AISTVGSKDI AAVPITNAES ALQGRAAGVT VVNGAPGSNP TVTIRGLATM GNSAPLYVID GVLTGNLSGL SPNDIESMSV LKDASTTALY GSKAFNGVIM VTTKKGKKGP GQLTFSTYAG FQTITKRYDV LNTQQYLQYA KDLGSDLTAR AAEFGNINTN WQDKIFQSGL MQDYNLSFSN GTETSTARYS AEYLKQEGAV INTGFERYSF RANNTQDIGR LKVGSNIGIS FSTINPERSS GGRTLLEHAI KMAPYLPVYN DASLGGYQGP SAIDGNDAEN PVRVANLGYQ KINNLSIIGN IYAELEILKG LKFKSQVSLD YYTGKDHTFV PSYADGSYHR QAFSTTNETN SQGQTIVYDN SLTYKTTFAA KHNLEVLGVI TKIDGKSQNL VAGSRYNISD EIDQLRYNEG NLSSANYVEK NIGYIARINY DYDDKYLLAV SGRRDASSRF GANNRWGNFY SIAAGWNIAK ESFMENSIFS TLKLRASTGT TGNDRIDNYQ YAATLLADYN YPIAGGNAPG VSLGVASNPD LKWESKKDRN IGVDFGLFDD QFTGSFEYFN NKSSDILFAV PLAASVGSAG GGTQIQNIAD VKVSGYEISL SYNDRKGDFT WSATANLGTS KNEVTSLAPG VTSVLGGPTA RAGLENFSRL EVGQPLFYFY GYQTNGIYQN QAEVDAVFGP GQTNIQPGDI KIVDRDGNKV INSNDKTNIG NPYPDFTYGL NITAAYKKFD FNCFITGVQG NDIYNANTFD LKGMNRLFNA STDVLDRAIV ANGVVTNPSA TLPRAQGADI NWSSANQRYI EDGSYTRLKN ITLGYTLSGE TFDNHFSNIR FYVSGQNLIT ITKYTGLDPE IARADGNANS AGIDLGRYPQ PKSVIFGLDV KF
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