| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3835 |
|---|
| Symbol | |
|---|
| ID | 5093746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4543366 |
|---|
| End bp | 4545087 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644743257 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_001196165 |
|---|
| Protein GI | 146301574 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.888346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACT ACTTACACGG CTTACTTGAC GAAGACAATG ACATTATTAT CCAGCAGTAC
TTAAAGTACA TTGACCAGGG AATCCCGCCT ACGGATAAAC CAAAAGACGT ATTAATTATT
GGTGCCGGAA TGGCTGGAAT GGTAGCAGCA GGTATGTTAA AACAAGCTGG CCATAATGTT
ACTATAATCG AATCAAACAC CCGAGTGGGC GGCAGAATCA AGACTTTTAG GAACTCTAAA
GACAAAAAAT ATTTTGAAGA TGATAGTGTC TATGGTGAAG CTGGTGCAAT GCGCATCCCA
ACCATACATC AAATGGTGCT CAAATACATC GATAAACTCG GACTCAAAAC GGAGCCATTT
TATTATCTGT CTGTTGACAA AAAACAAGCA ATCGCACATC AAGCAGACCC TTCTAAACCT
GAGCCTGAGG TGACCAGAAA TTCCCTTTTT TATGTTAACC GCAAACGTGT TGTTCAAAAT
GAATATATTC CAAAAGATAC AACTAAGGTC GTTGATGTAA ACAAACTGCT GGACTTTCAT
TTGAGCAGCA GTGAAAACAT GCGTGCCGAC CAGTTAATGG CTAATCTTAT TAATCCTCTT
AAAGCTTTTA TTGCAGAAGA TCCTGAGAAA AACTGGCCTT TGCTTATTGA GCGTTACGGA
GAATATTCGA TGCGTCGTTT TTTAAAGGAA AATTCGATGT ATTCAGAGAA CGCCATCGAG
ATGATTGGGG TTATGCAGAA TCTGGAGTCC AGAATGGCTT ATGACTTTAT CCAGAGTTTT
ATTGAACAGA ATATCATCAA AGATTCTACT CGCTTTTTGG AAATTGTCGG AGGAAGCGAT
CTGCTGCCAA ATGCACTCTT CAAAGCTCAC AGTCTGGAAG AAAACACCTA TTTTGACTGC
AGGATGACTA AAATGATGCT CGTTAACGAT AAGGTGAAGG TTGAGGTGGA TATTGAGGTG
CAGCGTGACT TTCAATTTTA TGAAGATGCA GGATTCAAAG CCTTAAAAAC ACCTGTTAGT
GACCTGGAAT TTGATGAAAT AATTGTCACA ATACCGTTTT CAGCTTTAAG ACATGTGTAT
GTAACACCAC AGTTCAAGCA GCTTAAAAGA AAAGCGATCC GCGAACTGCA TTATGATTCT
GCAACTAAAA TACTGCTGGA ATTTCGCGAG AAATGGTGGC AGGAAGAACC TTATAATATT
GTTGGCGGCG GTACGATTAC TGATTTTTCA AACCGTTTCA CCTATTACCC GAGCAATGAC
TTAGGCAGTA ACGGACATGG CGTTGTATTA GCATCCTACT GCTGGTCTGA TGAAGCAAGC
CGCTGGGATT CTATGGATGA CGATGACAGG TATTTTTATG CACTTAAGAA CCTGGCCATT
ATGCACTCTG ATGATAAAAA GGAACAGCAG CGTATTATCG ACCTTGCCGT AATCAGCTCG
AGCATTAAGG AGCGCAAGTA CAAAAACGGA AAATTAATTG GCGGCGCAAC ACAAAGCTGG
ATGCGCGACC CGTATGCTTA TGGTGAAGCC GCAATCTTTA ATCCGGGACA ATTGCACTTA
TTGCAGCGCC ATATCATCTC AACTGAATGG AATGGAAAAG CACATTTTGC AGGTGAGCAT
ACTTCTCTGA AACATGCCTG GATTGAAGGT GCAATTGAAT CTGGAATCCG CACCGCGCTT
GAAGTCAACG AAAATACTGG TAACCTTAAT AACCCGATTT AA
|
|---|
| Protein sequence | MENYLHGLLD EDNDIIIQQY LKYIDQGIPP TDKPKDVLII GAGMAGMVAA GMLKQAGHNV
TIIESNTRVG GRIKTFRNSK DKKYFEDDSV YGEAGAMRIP TIHQMVLKYI DKLGLKTEPF
YYLSVDKKQA IAHQADPSKP EPEVTRNSLF YVNRKRVVQN EYIPKDTTKV VDVNKLLDFH
LSSSENMRAD QLMANLINPL KAFIAEDPEK NWPLLIERYG EYSMRRFLKE NSMYSENAIE
MIGVMQNLES RMAYDFIQSF IEQNIIKDST RFLEIVGGSD LLPNALFKAH SLEENTYFDC
RMTKMMLVND KVKVEVDIEV QRDFQFYEDA GFKALKTPVS DLEFDEIIVT IPFSALRHVY
VTPQFKQLKR KAIRELHYDS ATKILLEFRE KWWQEEPYNI VGGGTITDFS NRFTYYPSND
LGSNGHGVVL ASYCWSDEAS RWDSMDDDDR YFYALKNLAI MHSDDKKEQQ RIIDLAVISS
SIKERKYKNG KLIGGATQSW MRDPYAYGEA AIFNPGQLHL LQRHIISTEW NGKAHFAGEH
TSLKHAWIEG AIESGIRTAL EVNENTGNLN NPI
|
|---|
| |