Gene Fjoh_3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3817 
Symbol 
ID5089626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4523731 
End bp4524825 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content35% 
IMG OID644743239 
Productbeta-lactamase 
Protein accessionYP_001196147 
Protein GI146301556 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA TTTTTTTTAT TTTACTGCTA TCATTTTTTT CATTTAATCT GGTTTTGTCC 
CAGCATAAAA AAACAGAAAT CATCAATTGT CTCAAAAAAG AAATGGAGGA CAAAAAAATT
CCAGGATGCC AGCTGATAGT GCTGAAAGAT GATAAAATTG TGCTGTCTCA AGCTATTGGA
ACCGCTTACC TGCCATTTTC GGTACCTGTC AGAAAGAATA CTGTTTTTTC AATAAATTCA
ATCTCTAAAG TTTTTACTTC AGTTGCTGTG ATGCAATTAC AGAACCAGAA CAAACTCAAT
ATTAATGACC GCATTTCCAT CTATATGGAT TCAATTCCTG AAAACTGGAA AAAAATAACT
ATTAAACAAT TGATGAGCCA CACATCGGGG CTTCCGGACA TTGAAGATGA GAAAGGCTTA
ATTGGAGATA AGGGGCAGGA TTCAGCGTGG CTGAAAGTAA AAAAATTACC ATTACTATCA
GAAGCTGGGG AGCAGTTTAA TTATAATGCG ACTAACTATT ATATATTACA GCGGATTATT
GAAAAATGCA GTGGTGAACC ATTTGAAAAG TTTGTCCGAA AAAATCAGTT TGATATCTTA
GGAATCAAAC AAATATTCTA CGGAAACTCT TATGATGTAA TTAAAAATAA ATGCCCGACT
TACAGCTATT ATAGTCAAGA CAAAACAACG GGTGAATATA TCAAGGGAGT AAAATTAAAG
GAGACTTATG AAGAATTTCC ATCAAAAATG ATAACCGATG CAGGTGCATT TACAACAGCT
GAAGAAATGG CAAAATGGAT AATCGGACTT CAAACGGGTA AACTCCTTAA CAATAATAAA
GATATAGCTG CCATTTGGGA ACCGGTAAAA TTGAAAAATG GTTCTTATGA CGGCTTTGGC
GGACTTTTAA ATGCTTATGC TTTAGGATGG CCGGTAATTA CAAGGAAAAA CCATTTTGCA
GTTGCCTCTA TTGGCGGTGG CCGCGCCGCT TTTATTATTT ACCCTGAAGA TAAACTTGCC
ATCATTCTTT TTACAAATCT GACGGGTGCT GGTCCAGAAG AAATTATCGA AAAACTAGCA
GATTTTTATT TCTGA
 
Protein sequence
MRNIFFILLL SFFSFNLVLS QHKKTEIINC LKKEMEDKKI PGCQLIVLKD DKIVLSQAIG 
TAYLPFSVPV RKNTVFSINS ISKVFTSVAV MQLQNQNKLN INDRISIYMD SIPENWKKIT
IKQLMSHTSG LPDIEDEKGL IGDKGQDSAW LKVKKLPLLS EAGEQFNYNA TNYYILQRII
EKCSGEPFEK FVRKNQFDIL GIKQIFYGNS YDVIKNKCPT YSYYSQDKTT GEYIKGVKLK
ETYEEFPSKM ITDAGAFTTA EEMAKWIIGL QTGKLLNNNK DIAAIWEPVK LKNGSYDGFG
GLLNAYALGW PVITRKNHFA VASIGGGRAA FIIYPEDKLA IILFTNLTGA GPEEIIEKLA
DFYF