Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3813 |
Symbol | |
ID | 5089622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4520530 |
End bp | 4521510 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644743235 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_001196143 |
Protein GI | 146301552 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CCTTTTTTAT GCTGCTATGC ATGGTTGTCT CAGCAGGATG TGACAGCGAA AAAAAAACAT CGGGTACTCC AGTGGTTCTT AAAGGCAGAT ATACGCTGAC AGAGACTGGA CTTTATCCTG AAGGGATTGA CTATGATTTA AACAATGGAA GGTTTCTGTT GAGCTCCCTT TATAAGGGTG TTGTCTATTC AGTAAATCCA AAAGGCGAAA TGGCTGTTTT TGCATCAAGC AGTAAACTTG TTCTGCCTAC AGGCGTTTTT ACAGATGAAA CCAGAAACCG ATTAATAGTG GCTAATGCTG ATTTAGGTGT TTCGCAGAAA AGCACCGCTT CAAGTGCCGG AACAATTGCC TCGGTAAGTG TTTTCGATCT TTCATCAGGA GCGTTAATCA AAGAAATTGA TTTAAAAAAT TTCACGCCAA ATAAAGGTTC GTGTCCAAAT GATATTGCGG TGGATAATGA AGGAAATATT TATATAACCG ATTCGTTCGC TCCCAATATC TATAAAATTG ATCTTAATTA TAATGCGTCG ATATTTGCCA GCAGTATGCT TTTTACACCC GCCGCTGATA AATTCGGATT AAATGGAATT GTTTTCCACC CAGACGGCTA TCTGCTGGCC GTAAAAACAG ATGACGCTAA GCTGTATAAA ATTTCTCTCC CTGTTCCGTC ATCCGTTACT GAAGTGAAGG GAATGTCTTT CAGTTCTCCA GACGGCATTG AGCTTGATAA AAACAATAAT CTTGTGCTGG TAGAAAACGG CCTAGGCCAG GGTACTGCAT ACACGTTTTC CAGCAGTGAT AAATGGAAAA CGGCCGTAAA AATCAAGCAG ACCAATATTG GAAAGCAGGA ATTTCCAACC ACAGCGGCAA TGGCATCAGA TGGGAATATA TATGTTGTGA ATTCGAAATT AGGAGAACTT CTTTCGGGAG ATCGATCGCA GTCAATTTAC ACCATTCAAA AAATAGACTG A
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Protein sequence | MKNTFFMLLC MVVSAGCDSE KKTSGTPVVL KGRYTLTETG LYPEGIDYDL NNGRFLLSSL YKGVVYSVNP KGEMAVFASS SKLVLPTGVF TDETRNRLIV ANADLGVSQK STASSAGTIA SVSVFDLSSG ALIKEIDLKN FTPNKGSCPN DIAVDNEGNI YITDSFAPNI YKIDLNYNAS IFASSMLFTP AADKFGLNGI VFHPDGYLLA VKTDDAKLYK ISLPVPSSVT EVKGMSFSSP DGIELDKNNN LVLVENGLGQ GTAYTFSSSD KWKTAVKIKQ TNIGKQEFPT TAAMASDGNI YVVNSKLGEL LSGDRSQSIY TIQKID
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