Gene Fjoh_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3813 
Symbol 
ID5089622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4520530 
End bp4521510 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content40% 
IMG OID644743235 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001196143 
Protein GI146301552 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CCTTTTTTAT GCTGCTATGC ATGGTTGTCT CAGCAGGATG TGACAGCGAA 
AAAAAAACAT CGGGTACTCC AGTGGTTCTT AAAGGCAGAT ATACGCTGAC AGAGACTGGA
CTTTATCCTG AAGGGATTGA CTATGATTTA AACAATGGAA GGTTTCTGTT GAGCTCCCTT
TATAAGGGTG TTGTCTATTC AGTAAATCCA AAAGGCGAAA TGGCTGTTTT TGCATCAAGC
AGTAAACTTG TTCTGCCTAC AGGCGTTTTT ACAGATGAAA CCAGAAACCG ATTAATAGTG
GCTAATGCTG ATTTAGGTGT TTCGCAGAAA AGCACCGCTT CAAGTGCCGG AACAATTGCC
TCGGTAAGTG TTTTCGATCT TTCATCAGGA GCGTTAATCA AAGAAATTGA TTTAAAAAAT
TTCACGCCAA ATAAAGGTTC GTGTCCAAAT GATATTGCGG TGGATAATGA AGGAAATATT
TATATAACCG ATTCGTTCGC TCCCAATATC TATAAAATTG ATCTTAATTA TAATGCGTCG
ATATTTGCCA GCAGTATGCT TTTTACACCC GCCGCTGATA AATTCGGATT AAATGGAATT
GTTTTCCACC CAGACGGCTA TCTGCTGGCC GTAAAAACAG ATGACGCTAA GCTGTATAAA
ATTTCTCTCC CTGTTCCGTC ATCCGTTACT GAAGTGAAGG GAATGTCTTT CAGTTCTCCA
GACGGCATTG AGCTTGATAA AAACAATAAT CTTGTGCTGG TAGAAAACGG CCTAGGCCAG
GGTACTGCAT ACACGTTTTC CAGCAGTGAT AAATGGAAAA CGGCCGTAAA AATCAAGCAG
ACCAATATTG GAAAGCAGGA ATTTCCAACC ACAGCGGCAA TGGCATCAGA TGGGAATATA
TATGTTGTGA ATTCGAAATT AGGAGAACTT CTTTCGGGAG ATCGATCGCA GTCAATTTAC
ACCATTCAAA AAATAGACTG A
 
Protein sequence
MKNTFFMLLC MVVSAGCDSE KKTSGTPVVL KGRYTLTETG LYPEGIDYDL NNGRFLLSSL 
YKGVVYSVNP KGEMAVFASS SKLVLPTGVF TDETRNRLIV ANADLGVSQK STASSAGTIA
SVSVFDLSSG ALIKEIDLKN FTPNKGSCPN DIAVDNEGNI YITDSFAPNI YKIDLNYNAS
IFASSMLFTP AADKFGLNGI VFHPDGYLLA VKTDDAKLYK ISLPVPSSVT EVKGMSFSSP
DGIELDKNNN LVLVENGLGQ GTAYTFSSSD KWKTAVKIKQ TNIGKQEFPT TAAMASDGNI
YVVNSKLGEL LSGDRSQSIY TIQKID