| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3485 |
|---|
| Symbol | |
|---|
| ID | 5089686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4163212 |
|---|
| End bp | 4163958 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644742910 |
|---|
| Product | Beta-lactamase |
|---|
| Protein accession | YP_001195818 |
|---|
| Protein GI | 146301227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAT TAGCTTCGAT AATTTTATTC TTAGCCGCGG TTTCAAATAG TTTGGGACAA
TCTAAGAATT CGCCATTACA AATAAGTCAT CTTACAGGTG ACTTTTATGT TTATAGAACT
TTTAATGATT ACAAAGGAAC TAAGATTTCT GCCAATGCTA TGTATGTTGT TACAGATAAA
GGCGTTGTGC TTTTTGATGC GCCTTGGGAT AAAACACAGT TTCAGCCGTT ATTAGACAGC
ATAAAAGCAA AACACAATAA AGAGGTTGTG ATGCTTTTTG GCACGCATTC TCATGAAGAT
CGTGCAGGAG GATTTGATTT TTACAAGAAA AAAGGAATCA AAACGTACTC AATTAAACTG
ACTGATGATA TTCTTAAAAA GAATAAGGAA CCAAGAGCAG AATTTATAAT TTCAAATGAT
ACAACATTTA CTGTTGGAAA TCATACTTTT GAAGTTTATT ACCCAGGAAA AGGACATGCT
CCTGATAATA TTGTAGCATG GTTTAAAAAA GAGAAAATTC TTTACGGAGG CTGTTTTGTA
AAAAGTGCAG AAGCATTAGA TTTAGGTTAT CTGGGTGATG CTGATGTTAA AGAATGGCAG
AAATCTATAA AAAAAGTGCA GGCAAAATTC AAAAAACCGG ATTATATAAT TTCGGGACAT
GATGACTGGA CTAGTAAAGA ATCTTTAAAT CATACTTTGA AATTGGTTGA CGAGTATTTG
GCTCAAAAAT CTGCCGGAAA AAAGTAA
|
|---|
| Protein sequence | MRKLASIILF LAAVSNSLGQ SKNSPLQISH LTGDFYVYRT FNDYKGTKIS ANAMYVVTDK
GVVLFDAPWD KTQFQPLLDS IKAKHNKEVV MLFGTHSHED RAGGFDFYKK KGIKTYSIKL
TDDILKKNKE PRAEFIISND TTFTVGNHTF EVYYPGKGHA PDNIVAWFKK EKILYGGCFV
KSAEALDLGY LGDADVKEWQ KSIKKVQAKF KKPDYIISGH DDWTSKESLN HTLKLVDEYL
AQKSAGKK
|
|---|
| |