Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3428 |
Symbol | |
ID | 5093676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4095178 |
End bp | 4096248 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742853 |
Product | peptidase M20 |
Protein accession | YP_001195761 |
Protein GI | 146301170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00953913 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA TAGATACGCT TACTCAGGAA GCAATTAGTT TATTAAGAAG CTTAATCGAA ACCCCTTCGT TTTCAAGTGA AGAAGATCAG ACGGCTCTTT TAATCGAAAA TTGGTTCAAT CAAAATGAAA TTCCATTCAA GAGAGAAAAC AACAATGTGT GGGCTTTCAA CAAATATTTC GACGAAAACA AACCAACACT TTTATTAAAC TCACATCACG ATACTGTACG ACCAAATCAG GCATACACCA ACGATCCGTT TAAAGCAATC GAAAAAGACG GAAAATTATT CGGATTAGGA AGTAATGATG CAGGCGGATG CCTGGTTTCG TTATTAGCAA CATTTGTACA TTTTTACGAA AATCAAAACC TATCCCATAA TATTGTAATT GTGGCTTCTG CCGAAGAAGA AAGCAGTGGA AAAAACGGTT TAAACAGCGT TTTAAAAAGC TTACCAGAAT TAGATTGCGC GATTGTAGGA GAACCAACGT TAATGCAATT AGCAGTTGCA GAAAAAGGTC TTTTAGTTTT GGATGTAAAA GTAAAAGGAA CTGCGAGCCA CGCTGCGCAT CAAAACGACG ATAATGCATT ATATAAATCA ATTCCGGTAA TGGAATGGTT TAAAAACTAT AAATTCGACA AAATCTCAGA TGTTTTAGGT CCTGTAAAAA TGACCGTAAC GCAAATTAAT GCAGGAAAAC AGCATAATGT TGTACCGTCA GAATGTGATT TGGTAGTGGA TATTCGTGTA ACAGACCGAT ATACCAATGC TGAAATTCTA GAAGTAGTAA AAGCAAATGT AAATGCCGAA GTAACGCCAA GATCAATGCA TTTAAATGCA TCGTCTATTC CAATTGAGCA CGGTTTGGTT CAGGCTGGAA TCGCATTAGG AAGAACAACG TATGGTTCGC CAACACTTTC TGACCAATCC GTTTTAAGCT GTCAGTCTTT AAAATTAGGA CCAGGAGAAA CATTGCGTTC GCATTCAGCT GACGAATTTA TTTTTGTAAA TGAAATTGTA GAAGGAGTCG ACTTGTATAT TAAAATACTA ACTGATTTCT TTAAATTATA A
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Protein sequence | MKNIDTLTQE AISLLRSLIE TPSFSSEEDQ TALLIENWFN QNEIPFKREN NNVWAFNKYF DENKPTLLLN SHHDTVRPNQ AYTNDPFKAI EKDGKLFGLG SNDAGGCLVS LLATFVHFYE NQNLSHNIVI VASAEEESSG KNGLNSVLKS LPELDCAIVG EPTLMQLAVA EKGLLVLDVK VKGTASHAAH QNDDNALYKS IPVMEWFKNY KFDKISDVLG PVKMTVTQIN AGKQHNVVPS ECDLVVDIRV TDRYTNAEIL EVVKANVNAE VTPRSMHLNA SSIPIEHGLV QAGIALGRTT YGSPTLSDQS VLSCQSLKLG PGETLRSHSA DEFIFVNEIV EGVDLYIKIL TDFFKL
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