| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3415 |
|---|
| Symbol | |
|---|
| ID | 5093663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4080687 |
|---|
| End bp | 4081949 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644742840 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001195748 |
|---|
| Protein GI | 146301157 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.446886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AATTAGCATC AGTATCCCTT TTACTATTAG CACTTACAGC AGGTGCTCAA
AATATGGCTA CCACATCAGC AAAACCAAGT GTTGACCAAC CAGAATACAA TAAATGGTCT
ATCGAACTTA ATGGTGGTGT TAATAAACCA ACCCGTGCAA TGACTGCAGG TTATACTACA
GAATCTTTAA ATTTCTTTCA CGGTGATTTA GGTGTAAGAT ATATGTTTAA TCCTAAGTTT
GGGGTAAAAT TAGATGTAGG TTACGACCAG TTTAAAGAAA AGAAAAACAC ACCTGATTTT
GAAAGCCGCT ATGTTAGAGC CAGTTTTCAG GGGGTTGTTA ACGTAGGACG TGCTTTAAAT
TTTGAAACCT GGACAAATAC AATTGGTATT TTGGCACATG GTGGTTTTGG GGTTTCGCAA
ATTAGTACTG AAACTGGATT TGGAGGGCAG GATTATATGG CTCACGGAAT CGCAGGTATT
ACAGGACAAA TCAAACTTAG TAACAGAGTT GCTTTGACTG GTGACCTTAC AGGAATTGTG
AATGGAAGAC AAAACTGGAA TTTTGACGGT ATGGGTAATA CTACTACAGG TTCTTTTGAT
GGTGTATTAT TAAACGCTTC TGTTGGTTTA ACTTTTTACT TAGGTAAAAA CGAAAAACAT
GCTGACTGGG TTGGCGAAGA AGACAGAATT GGTGAATTGG AAAAAAGAGT GGACTTAATC
GAAACTGGTC TTATCGATTC AGACAAAGAC GGAGTTGCTG ATTTATACGA TTTAGAGCCT
AATACAATTG CAGGAGTTGC TGTTAATACA AAAGGACAAT CTATTGATAC AAATCAAAAT
GGTGTGCCGG ATGAGCTAGA AAGCTATTTA GATAAAACTT ACGAAAAGAA AGGCAGCGGA
ACTGCTACAA ACAATACAGT TGAAGAGTTA ATTAACGGTG GTTATGTAAA TGTTTATTTT
GATTTCAATT CATCTAAACC TACAAATGCT TCTTTATCTG GTGTTGATTT CTTAGTGAAA
TATTTGAAAA ATAATCCAGG AAAATCTGCT GACATTATTG GTTATGCTGA CGAAATTGGA
AAAACAAGTT ACAATACTGA ATTATCAAGA AAAAGAGCTG AAGCAGTGAA AAAAGTAGCT
GTAAACGCTG GAATCGATGC TTCAAGATTG AATGTAATTG CTAACGGAGA AGATACTTCG
GTTAACAAAA ACTCTAAAGA AGCACGTCAA ATCGTGAGAA GAGTTACTTT CCAAGTAAAA
TAA
|
|---|
| Protein sequence | MKKKLASVSL LLLALTAGAQ NMATTSAKPS VDQPEYNKWS IELNGGVNKP TRAMTAGYTT
ESLNFFHGDL GVRYMFNPKF GVKLDVGYDQ FKEKKNTPDF ESRYVRASFQ GVVNVGRALN
FETWTNTIGI LAHGGFGVSQ ISTETGFGGQ DYMAHGIAGI TGQIKLSNRV ALTGDLTGIV
NGRQNWNFDG MGNTTTGSFD GVLLNASVGL TFYLGKNEKH ADWVGEEDRI GELEKRVDLI
ETGLIDSDKD GVADLYDLEP NTIAGVAVNT KGQSIDTNQN GVPDELESYL DKTYEKKGSG
TATNNTVEEL INGGYVNVYF DFNSSKPTNA SLSGVDFLVK YLKNNPGKSA DIIGYADEIG
KTSYNTELSR KRAEAVKKVA VNAGIDASRL NVIANGEDTS VNKNSKEARQ IVRRVTFQVK
|
|---|
| |