Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3406 |
Symbol | |
ID | 5093654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4070385 |
End bp | 4070951 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644742831 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001195739 |
Protein GI | 146301148 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.122321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA AAAGCAGTGT AAAAGAAAGA ATACTCGATA CAGCATCTCG TTTGTTTTAT CATCAGGGAT TCAATAGCAC AGGAATTAAT CAGATTATTG CAGAGGCAGA TATTGCGATT GGTTCACTTT ACAAGCACTA TGAGTCAAAA AGTGATTTGT TGTACCATTA CCTTGAACAG CAGGAAACAG AATATTTTGC CAATCTCAAT GACTATTTAA AAGACGAGAA ACAGCCGTTA AAAAAGCTTC TTAAATTAAT AGATTATCGT ATTAAACTTC AGGAAGAATC AAATTTTTCA GGATGCCATT TTATAAAAAT AAATGCTGAA ATAGGCAGAG AAGATAAAAA AATAGAACAG TTTGTTCTGG CGCATAAAGA GCGCCAGCGT GAGTACATTA ATGTGTTAAT TGATGAAATT AGTACAGAAA AAACACTTTT GATAGAAAAA AATGCACTGC AAAACAGTAT TTTTTTGATG ATAGAAGGAG CTGTAGTTTC GGCAGGTATA AATGGAAATA CGAATGATTT AAAAGCCGTA AAAAAAAGTA TAAATCAGTT TTTCTGA
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Protein sequence | MKQKSSVKER ILDTASRLFY HQGFNSTGIN QIIAEADIAI GSLYKHYESK SDLLYHYLEQ QETEYFANLN DYLKDEKQPL KKLLKLIDYR IKLQEESNFS GCHFIKINAE IGREDKKIEQ FVLAHKERQR EYINVLIDEI STEKTLLIEK NALQNSIFLM IEGAVVSAGI NGNTNDLKAV KKSINQFF
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