Gene Fjoh_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3406 
Symbol 
ID5093654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4070385 
End bp4070951 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content32% 
IMG OID644742831 
ProductTetR family transcriptional regulator 
Protein accessionYP_001195739 
Protein GI146301148 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.122321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA AAAGCAGTGT AAAAGAAAGA ATACTCGATA CAGCATCTCG TTTGTTTTAT 
CATCAGGGAT TCAATAGCAC AGGAATTAAT CAGATTATTG CAGAGGCAGA TATTGCGATT
GGTTCACTTT ACAAGCACTA TGAGTCAAAA AGTGATTTGT TGTACCATTA CCTTGAACAG
CAGGAAACAG AATATTTTGC CAATCTCAAT GACTATTTAA AAGACGAGAA ACAGCCGTTA
AAAAAGCTTC TTAAATTAAT AGATTATCGT ATTAAACTTC AGGAAGAATC AAATTTTTCA
GGATGCCATT TTATAAAAAT AAATGCTGAA ATAGGCAGAG AAGATAAAAA AATAGAACAG
TTTGTTCTGG CGCATAAAGA GCGCCAGCGT GAGTACATTA ATGTGTTAAT TGATGAAATT
AGTACAGAAA AAACACTTTT GATAGAAAAA AATGCACTGC AAAACAGTAT TTTTTTGATG
ATAGAAGGAG CTGTAGTTTC GGCAGGTATA AATGGAAATA CGAATGATTT AAAAGCCGTA
AAAAAAAGTA TAAATCAGTT TTTCTGA
 
Protein sequence
MKQKSSVKER ILDTASRLFY HQGFNSTGIN QIIAEADIAI GSLYKHYESK SDLLYHYLEQ 
QETEYFANLN DYLKDEKQPL KKLLKLIDYR IKLQEESNFS GCHFIKINAE IGREDKKIEQ
FVLAHKERQR EYINVLIDEI STEKTLLIEK NALQNSIFLM IEGAVVSAGI NGNTNDLKAV
KKSINQFF