Gene Fjoh_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3397 
Symbol 
ID5093645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4060382 
End bp4061329 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content36% 
IMG OID644742822 
Producthypothetical protein 
Protein accessionYP_001195730 
Protein GI146301139 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.193975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAA GAAAAAGAAT ACCAATGAAG TACGTTCTCG GGAAAATTAA AGTAGAAATT 
GCTCTGGTAC TGGCTTATAC CGTACTATTT GAAATATTTC ACCATTATTT TGTTACACTT
CCCGTAGATA TTCCAATTGC GATTCCAACC ATGATTGGAA CCATTATATC TCTATTATTA
GCTTTTAAAT CCAATCAGGC GTATGACCGC TGGTGGGAAG CCCGAATTGT GTGGGGAGCC
GTTGTAAACG ATTCGAGAAC CTTAATCCGT CAGGTGCTGA CGTTTTATAA AGACCCTGAT
TTTTCTGTTG AAGCAAGCGA ATTCAAAGAA AACTTTGCTA AAAGACAAAT CGCCTGGTGT
TATAGTTTAG GAGAATCGCT TCGAAACCGA GACGCTATAA AACCGTTAAA AGGTTTAATG
AGCGATGAAG AAATAAAATA CATCAAGAAC CATCAAAACG TTCCAAATGC TATTTTAATG
CTTCATGCGC GCGATCTTAG AAATGCTAAA ATCGAGAAGA AAATCAATAT GTACCAGCAG
GTTGAAATTG ATAATACGCT ATCGAGATTA TGTGACGAAA TGGGAAAATG CGAGAGAATT
AAAAACACCA TTTTTCCAAC CACATACAGC ATGTACATTA GGCTGACCTT GTGTTTGTTT
ATTTTATTAC TGCCGTTTGG ACTGACTAGT GTATTAAGCT GGTTTGCAAT TCCGTTAATT
ACAGCAATTG GTGCGGCTTT CTTTTTGATC GAAAGAATGG CAATTCATTT ACAGGATCCG
TTCGAGAACA GACCAACAGA TACGCCTGTA ACGGCAATTG CCAATACAAT TGAAAAAAAT
ATCAAGCAAA TGCTGAATGA ATATCAAAGT GAATTTGATA TCCTGAAAGA ATTTGATCTA
AACGACGAAC CTAAGAAAGT CGAAAAAGAC GCTTATTTCG TTTTATAA
 
Protein sequence
MLLRKRIPMK YVLGKIKVEI ALVLAYTVLF EIFHHYFVTL PVDIPIAIPT MIGTIISLLL 
AFKSNQAYDR WWEARIVWGA VVNDSRTLIR QVLTFYKDPD FSVEASEFKE NFAKRQIAWC
YSLGESLRNR DAIKPLKGLM SDEEIKYIKN HQNVPNAILM LHARDLRNAK IEKKINMYQQ
VEIDNTLSRL CDEMGKCERI KNTIFPTTYS MYIRLTLCLF ILLLPFGLTS VLSWFAIPLI
TAIGAAFFLI ERMAIHLQDP FENRPTDTPV TAIANTIEKN IKQMLNEYQS EFDILKEFDL
NDEPKKVEKD AYFVL