Gene Fjoh_3220 details

Gene Information

• Locus tag: Fjoh_3220
• ID: 5093382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3836656
• End bp: 3838512
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644742648
• Product: Rhs element Vgr protein
• Protein accession: YP_001195556
• Protein GI: 146300965
• COG category: [S] Function unknown
• COG ID: [COG3501] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01646] Rhs element Vgr protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAC AAACAATAAC CACCATTAAA GTAGGCGAAA TCAGGATTAC CAATTTTAAT 
AAATTAAAGA TATTTCAAAC CATCCACGAC CACCATACTT TTTCATTTGA AGTAAGACAG 
GATTTATTAG TTGACGAGTT TAAAAGTGTG ATGCCTTTTT CCCAGAAACT GTACGGCGAG 
AAAATCAGCA TCGAAATAAA ACCTATAGAC GGCCTGGAAG ATCTTATGAT TGGCGCAGAC 
CTTAAACATT ATACCATGCA GTTCTATGGT GTTGTGACCA AAGTAAAACT GAAGAAATCC 
CGTGTAAAAG ATATAGAAGA AATTATCGTA ATAAAAGGAA AAAGCTCCAC GATAGCACTC 
GAAAACGGTC CCGAATGCAG TTCTTTTACC AATATGACCC TGAGTGATAT TGTAACCAAA 
GTAAAATCAG GCTGTGATAT TGATATGGAT GTAAGACCTT TTTATTTAGA AAACCTGCCT 
TATACGGTGC AGTATAACGA AAGTAATTTT TCTTTTCTAA ACCGTCTGGC AAAAAGAAAC 
GGACACTGGC TGTATTATAA CGGACGCACC ACTGTTTTTG GAAGCCCCGG CGGTGTAGGC 
GGACAGCCCC AGTTAGTTTA CGGGGTAAAC ATGCAGGATT TTGATTATAC CATTAAACTC 
CTGCCGGCAA TGTTTAAAGT AATAGAAAAT GACAACCGCG ACGGCAGTTA CAGAACCGAT 
GAAACCTTAA AATACAGAAG GGAAGCCGAC GGTTTTCAGC AGAATTTTTT AAATAAGTCT 
AATGAGTTCT TTAATAAAGA AACCATAATA CAGCTCAACC AAAATCCTGT TGGAGGATCT 
GCACGACGCT CCTCAGAAGA ATATGCCAAA AACAAAATGC GCGCTATTTT AAGCCGTTTA 
ACAGAAGTAA AAGCCTCCAG CGAAGTTCCG GGAATTACGA TAGGAAATGA AGTCAGGATA 
GCAGGTGTCG ACGTACAGCT GGAAAGCTCC TACCGCGTAA TACAGATAAC CCACATCTGC 
GACGACGGAG GCGGTTATGA AAATTATTTT ACTGCCGTAA ACTTTAACGG TTCTGTATTC 
TCTCCCAAAA CCGACCCTGA TTTAGTGCCG TTCTGCAGAA GCCAGACCGC CATTGTAACG 
GGCAATGCAG ACCCGGACGG ACTCAGCGGC ATACAGGTGC AGATGCCGTG GCAGGAAGCC 
AAAGGCGAAA CCACTCCTTA TATTCCCTTC GTGCAGAAAT ACGGAGGCGA TGCCAGAGGA 
ATCCATACGC TGCCGGAAAT TGGCGATACA GTTTTTGTGG ATTTTCAGTG TAATAATGCC 
GAACTGCCTA TTGCAATGGG AACCATAACC AGCAGAAAAG AAAAAAGTGG TTTCAGCACG 
CCTAATAATG ATCTGAAAGT GATGAGAACG CGAAGCGGAA TTGAGACTCT TCGCAATGAT 
GCAGAAGGGA GCTGGAAACA GAGTACGCCC GATGGAAATT ATTTACTCTT TGACGGACAA 
GGAAATGCAA CACTAAATGT TCTTAAAAAC TTCACTATAA ATGTTGGTGA GGATTTAAAT 
ATTAATGTTG AAAGGAATAT GACTGCTGAT GTTGTAAACG ATAAAACAGA TACTGTAGGT 
GGCAATTATA GGGAAACCAT AAATGGGTCT AAATACATAT CCATAGGTAT TGATTTTATA 
ATTAGGGTGA TGGGCTGTTT TAAAGAATAT GTAAAAGGTA GAATTGAATC ACACTCAGAT 
AAAGAGCGAA AAGAGATTGG TTTAAAAGGA GTTGAAACAA GCAGTGAAGG CTCTATTAGT 
AAACATGCGC AAAAAAACTT GAATAACAAT AGCGGAGAAA ATTCGACCCA CAACTAA 

 

Protein sequence

MALQTITTIK VGEIRITNFN KLKIFQTIHD HHTFSFEVRQ DLLVDEFKSV MPFSQKLYGE 
KISIEIKPID GLEDLMIGAD LKHYTMQFYG VVTKVKLKKS RVKDIEEIIV IKGKSSTIAL 
ENGPECSSFT NMTLSDIVTK VKSGCDIDMD VRPFYLENLP YTVQYNESNF SFLNRLAKRN 
GHWLYYNGRT TVFGSPGGVG GQPQLVYGVN MQDFDYTIKL LPAMFKVIEN DNRDGSYRTD 
ETLKYRREAD GFQQNFLNKS NEFFNKETII QLNQNPVGGS ARRSSEEYAK NKMRAILSRL 
TEVKASSEVP GITIGNEVRI AGVDVQLESS YRVIQITHIC DDGGGYENYF TAVNFNGSVF 
SPKTDPDLVP FCRSQTAIVT GNADPDGLSG IQVQMPWQEA KGETTPYIPF VQKYGGDARG 
IHTLPEIGDT VFVDFQCNNA ELPIAMGTIT SRKEKSGFST PNNDLKVMRT RSGIETLRND 
AEGSWKQSTP DGNYLLFDGQ GNATLNVLKN FTINVGEDLN INVERNMTAD VVNDKTDTVG 
GNYRETINGS KYISIGIDFI IRVMGCFKEY VKGRIESHSD KERKEIGLKG VETSSEGSIS 
KHAQKNLNNN SGENSTHN