Gene Fjoh_3048 details

Gene Information

• Locus tag: Fjoh_3048
• ID: 5093578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 3612393
• End bp: 3613043
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644742479
• Product: hypothetical protein
• Protein accession: YP_001195387
• Protein GI: 146300796
• COG category: [S] Function unknown
• COG ID: [COG4291] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGGAA CAGTATTTAT CAACCGGCTC AGCAACAGGT CAAGGCTGGC AATTTCCGCT 
TCGGCGGGGC TGCTCACGGC CCTTGTCCTT GAGATAGGAA CCAGCAGGCC TTCGGTGCAC 
ATCATGGCGG TCTGGCTGGC TTTTTCGCTA ACCCAGCTGT TTTTCTCCTG GTTCACCATA 
TTCACCTGCC GTGTGGCCGA GCTCAAGAAG AACGCCAAAG ACCAGGACTC GGGACGCGCT 
GTGCTGTCCC TGTTCATGCT ACTTACAACG GCAGTAAGCC TTCTGGGCAT AGTGCTGCTG 
TATGTTTCAG CCGACCAGAA GACTGGTTCC GAGCTGGCGC TGCACGTGGT GATGACGCTC 
TCATCGGTGG GAACTGCCTG GGCGGTGGTC CATACCACCT TTGCCTTCAA ATACGCCAAC 
CTCCACTATT CGCTCAACGG CCTTGATTTT CCCGGAAAAG GCGAACCTGA CTATCTGGAC 
TTTGTCTATT TCTCATTTGT GATCGGCACC ACTTTCCAGG TATCGGATGT CGCCATACTG 
GACAGGAAGA TAAGGAGGAC CGCACTGGTG CACGGCGTGC TTTCCTTTAT GTTCAACACC 
ACCATACTGG CATTGAGCAT CAATATTATT TCCAGCATGG TCCAGCGCTG A 

 

Protein sequence

MNGTVFINRL SNRSRLAISA SAGLLTALVL EIGTSRPSVH IMAVWLAFSL TQLFFSWFTI 
FTCRVAELKK NAKDQDSGRA VLSLFMLLTT AVSLLGIVLL YVSADQKTGS ELALHVVMTL 
SSVGTAWAVV HTTFAFKYAN LHYSLNGLDF PGKGEPDYLD FVYFSFVIGT TFQVSDVAIL 
DRKIRRTALV HGVLSFMFNT TILALSINII SSMVQR