Gene Fjoh_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3007 
Symbol 
ID5090358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3554237 
End bp3555373 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content40% 
IMG OID644742439 
Productaminotransferase, class V 
Protein accessionYP_001195347 
Protein GI146300756 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.784545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGATA CTTTAATATA TTTAGACAAC AATGCCACTA CTGCCGTTGA CAATCGAGTT 
GTTGAGGTAA TTAATATTTA CTTCAATCAA CTTTATGGCA ATGCAAGCAG TCTTTATAAT
TTCGGATCTA AATCCAAATT AATTTTAGAA CAAGCAAGAA CCAGCATTTC TGATTTGATT
GATGCTGAGC CAGAAAGCAT CTATTTTACC TCGGGCGCGA CTGAAAGCGT CAACCTGGCA
TTGAAGGGTC TTGCATTAAG CCCTAAAAAT TCAAAAAAAC ACATCATAAC ATGCAGTACC
GAGCATAAAG CCGTATTGGA AACATGTGAG TATTTGCAAA GCATCGGATA TGAAATCGAT
TACCTGCCTG TTAATAATGG GGGAGCCATA GACCTTGAAG TCCTTAAATC CCTAATTAAA
GAGGATACTC TTTTGGTTTG TCTAATGTGG GTCAATAATG AAACTGGTGT CATTCACCCC
ATTAATGAAA TTGGGAAAAT AACTAAAGCC GCGGGGGTGT ATTTCGTCTG CGACGGCTCT
CAGGGAGTCG GAAAACTGCC TATCAGCGTA ACAAGCTCTA ATATTGACAT TTTCTGCTTT
TCTGGCCATA AATTGTACGC CAGTAAAGGT GTTGGAGGAA TCTATATCGG TTCCGAAATA
ACCCGTAATG ATAAAATACA GCCACTAATA CACGGCGGTG GTCAGGAAGA CAATTTGAGA
AGCGGCACGC ATAATGTCCC TTTAATTGCC GGATTAGGAA AAGCATTCGA AATTGCTAGG
GAAGAAATGC AGAAAAATGA AGATCATATA GTGCGGCTCA AAACCTTACT TGAATCTGAA
TTGTCAAAAA TGAGCCAGAC TTCTATTAAT GGCGTACAGG AACCAAGAAT CTTCAATACC
GTAAATGTGT GCATACTCGG CCTTGACAGC GAAGTTTTTA TCGGAATTAA CAGTGACATT
GCCGTGAGCA ACGGCTCTGC CTGCACCTCT GCATTAGTAC AACCTTCTCA CGTCCTTTTA
GCAATGGGAT TAAGCACTAA TGATGCCATG GACAGCATAC GCATTTCGAT AGGTAAATAT
AACACCGAGA GTGAGATTCA CCAACTCATC GAGCGGATCA ATAACTTTAT CAATTAA
 
Protein sequence
MRDTLIYLDN NATTAVDNRV VEVINIYFNQ LYGNASSLYN FGSKSKLILE QARTSISDLI 
DAEPESIYFT SGATESVNLA LKGLALSPKN SKKHIITCST EHKAVLETCE YLQSIGYEID
YLPVNNGGAI DLEVLKSLIK EDTLLVCLMW VNNETGVIHP INEIGKITKA AGVYFVCDGS
QGVGKLPISV TSSNIDIFCF SGHKLYASKG VGGIYIGSEI TRNDKIQPLI HGGGQEDNLR
SGTHNVPLIA GLGKAFEIAR EEMQKNEDHI VRLKTLLESE LSKMSQTSIN GVQEPRIFNT
VNVCILGLDS EVFIGINSDI AVSNGSACTS ALVQPSHVLL AMGLSTNDAM DSIRISIGKY
NTESEIHQLI ERINNFIN