Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2825 |
Symbol | |
ID | 5090455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3360438 |
End bp | 3361400 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742257 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001195166 |
Protein GI | 146300575 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00154924 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG AAGTTACAGA TAAAAACGGT TCAGGAATTC TGCATAAGCT TGCTGATGCA ATGGGAGCAT CTATCCGCGG GCGTTTCGTT GATATTCCCG AAAAATTAGG CGAAGGTTAT ATGACAGGAT TTACCTGGGG CAATGAGCTG CGCATGATGA TTCGGAATTA CTATTTAAAA GAAGAAATTG TACTCGAACG CAAAAATGAA ATTCCTGAGG GACAAGAAAA TGTAATATTT TTTCTAAGCG GTATTTTTGA TACTTCTTTG CAGCAAAAGG AAAAAACCTC TCCGGAACAG CCCAATGTTT TTATCTGCAT GCAGTCTGTT TCGTCTGTAG TTGCAATGCC TCAAAATACT TTTTTTAAAA GCATAACAAT TTCGGCATCC AGAGAATATT TACAGCAGCA ATTTGGAGCA CTGCATCATC CTGTTATTTC AAGCATCCTT ACTTCTAAAG ATACTTTTGT TTATGAAACC GGAATTTCTC CTGCAATGGT CACAACAGCA AGTGAAATGA TTCATCAATT GGTTCCGGAA AGTTTAGAAA ATCATTATAA TAAGCTCAAA TGCGAAGAAC TTTTATGTCA TATTTTCGCT TTGTTATTGC AGCGGGACGA AACTCCTGCA AGCGGCATTC ATATTAAAGA CATAAAATCG CTTTATGCCA TAAAATACCA TTTGCAGTCC AATCTTGATA AAGCACCTGA TATCGCTTCA TTAGCCAAAG AAGCCGGAAT GAGCGAGCCA AAACTTCGAA AATTATTCAA ACAGACTTTT GGAAAAGGTG TTTTTGAATA TTATCAGTTT ATGAGAATGC AGGAAGCGGC AAGGCTTTTA AAGGAAAATC ATCTATCTGT TTCAGAAGTT GGCTATGAGT TAGGATTTAC CAATTTAAGC CATTTTTCAA GGGTTTTTGA ACAGCATATT GGTTTAAAAC CGAAAAAATA TTCCAGCTTA TAA
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Protein sequence | MKIEVTDKNG SGILHKLADA MGASIRGRFV DIPEKLGEGY MTGFTWGNEL RMMIRNYYLK EEIVLERKNE IPEGQENVIF FLSGIFDTSL QQKEKTSPEQ PNVFICMQSV SSVVAMPQNT FFKSITISAS REYLQQQFGA LHHPVISSIL TSKDTFVYET GISPAMVTTA SEMIHQLVPE SLENHYNKLK CEELLCHIFA LLLQRDETPA SGIHIKDIKS LYAIKYHLQS NLDKAPDIAS LAKEAGMSEP KLRKLFKQTF GKGVFEYYQF MRMQEAARLL KENHLSVSEV GYELGFTNLS HFSRVFEQHI GLKPKKYSSL
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