Gene Fjoh_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2801 
Symbol 
ID5093246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp3333965 
End bp3334630 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content32% 
IMG OID644742231 
Productspermine synthase 
Protein accessionYP_001195142 
Protein GI146300551 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAA AACTATTCAG TTATCTTTAT CCAATTAAAA TCTTCAAAAA AAAATCGGCC 
AGAAGCAAAG TTATCGAAGT TACCTGGGCA AATGGAGAGC TGGTTTTAGA TTCTGAAAAC 
ACTAATTACT CTTACGGAAG TCTGCAGCGT ATATTAAGGT ACGGACTTCG AAATATTGGT 
TACAATAAAG TTCTCGAAAT GGATCATATA TTGGTTCTGG GAGTTGCCGG TGGCAGCGTA 
ATCAAAACGC TGGTTGATGA AATCGAATAT AAAGGAAAAA TTACGGGTGT TGAAATTGAT 
GCCGAGATGA TTCAGATTGC CAATCAGTAT TTTAACTTAA ATGAAATACA ACAGCTCGAA 
ATTGTAATTG ATGATGCTTT TGAATTTGTT TTAAAAACAA AAGATAAATA TGATTTAATA 
ATTATTGATA TTTTTGAAGA TACCAATATG CCGAACTTTT TGTTTGAAAA GTTTTTCAGC 
GAAAGAATTT GTTTTCTTTT AAAAGATCGG GGCTTTGTTT TATTTAATAC TATGATTTTA 
GACGAAGCTC ATAATGTTCG AAACAGAAAG TATATATCTG AAATAAATCC AGAATTGTTT 
ACTTCAAAAA TGCTGCCCCG CATAGAAGTG CATAATGAAC TAATAATAAT CGAAAAGCTG 
CCTTAA
 
Protein sequence
MIQKLFSYLY PIKIFKKKSA RSKVIEVTWA NGELVLDSEN TNYSYGSLQR ILRYGLRNIG 
YNKVLEMDHI LVLGVAGGSV IKTLVDEIEY KGKITGVEID AEMIQIANQY FNLNEIQQLE 
IVIDDAFEFV LKTKDKYDLI IIDIFEDTNM PNFLFEKFFS ERICFLLKDR GFVLFNTMIL 
DEAHNVRNRK YISEINPELF TSKMLPRIEV HNELIIIEKL P