Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2796 |
Symbol | |
ID | 5093241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3329865 |
End bp | 3331607 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742226 |
Product | amino acid permease-associated region |
Protein accession | YP_001195137 |
Protein GI | 146300546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA TAATACACAA AAAGTTAAAT CAATTGCAGG CAACGGCAAT CTGTGGAAAC GATATTAGTT CATCCTGTCT TTACGTATCG GCGTTAACGA TTTTGTATGC AGGACAATAT GCCTGGATTT CTCTTTTAAT TGTAGCAGTC GTTTTATTTT TATTCAGAAA AATTTATGGT GAAGTTGTTG GGGCAATTCC TTTAAATGGA GGAGCTTACA ATGTCCTATT AAATACATCT ACAAAACGTT TAGCATCTCT GGCTGCCACA TTAACCGTTT TGTCTTATAT GGCAACAGCT GTAATTTCGG CTTCAGAAGG AATGCATTAC CTGCACGGAA TTTTTGAAGG ATTAAATGTT ACCATTGCCA CAGTAGTTGT TTTAGTTTTA TTTACTTTTC TCGCAATCCT CGGAATTGGT GAATCTGCTT TTGTGGCTGT TATCATTTTT GTAACCCATA TCGCCACTTT GAGTTTGCTC GTTCTCGCTT CGATTTGGTT TATTTTAAAT CACGGATTAA ACGTTTTTCA TATTAATTGG GAAACGCCTA TTGCATTTGG CAGTATGAAA ACTGCTCTTT TTTTGGGTTT TTCTGCAGCA ATGCTCGGAA TTTCCGGTTT TGAAAGTTCT GCCAACTTTG TAGAAGAACA GCAGCAGGGC GTTTTTCCAA AAACACTGCG CAATATGTGG GCGCTTGTCA GTTTTTTTAA TCCCGTAATT GCAATTTTGT TAATAAGCGT AATTCCCCTG GCGCAAGTTG GAGAAAACAA AGAATCACTT TTAGCACATT TAGGAGAAAC AACAGGCGGA TCATGGCTGG CGTGGCTTAT TTCTATAGAT GCCGTTTTAG TTTTATGCGG TGCCGTTTTA ACTTCATTTG TGGGTGTCTC AGGATTATTA AACCGAATGA CTCTTGACAG AATCTTGCCT AACTTTTTTT TAAAACAAAA CAAAAGAGGT TCACATTATA GAATCGTAAT CAGCTTTTTG ATTCTTTGTA TATCAGTGCT TTTTGCTACA AACGGTCATT TAGAATCTTT GGCCGGGGTT TATACTTTTT CATTTTTAGC CGTAATGGCT TTATTCGGAA TCGGGAATCT GCTTCTTAAA TTTAAAAGAC GAAAATTACC AAGACCAGAG CGCGCGCACG GATTGGCTGT ATTTGCTGCC GTTTCTTTTA TCATTGCCGC TTTTATCGGA AATATGAAAT TAAACATTAA TGCTTTTTAC ACCTTTTTGC AATACATGGT TCCGGCTCTG ATTTTCATCG GAATAATGCT CAATCGTGTT ATGCTTATAA AAGTGCTTAT CGAAATTTTA GAATATTTCT ATCAGCCGCT TCGCAAAATG GTAATTCTCA GCAATCGTTA CCTTCAAAAT TTAAGTGCCG AAATTAATTC TCAGGAATTT GTTTTTTTTA CCAAAGGTGA TAATATTGCC ATTTTAAACA AAGTTCTTCA ATATGTAGAA GGCAACGAAA CGACCAAAAA GCTAAAAATT GTTTATGTAA AAAATGATGG TCTTATAAAC GAAGCTCTGG TAAAAGATTT AGAAGTTCTG GATCGAGCTT ACGACAATAT AGATATTGAA TACCTTGAAA TTGAAGGTGT TTTTGGTCCC GAAATTATAG ACGAATTATC TCAGAAATGG AAAATTCCTA AAAACTTTAT GTTTATAGGT TCTCCGGGAA ACAAATTTTC GTATCGTGTT TCAGATCTTG GCGGCGTACG TTTGATTATG TAA
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Protein sequence | MKEIIHKKLN QLQATAICGN DISSSCLYVS ALTILYAGQY AWISLLIVAV VLFLFRKIYG EVVGAIPLNG GAYNVLLNTS TKRLASLAAT LTVLSYMATA VISASEGMHY LHGIFEGLNV TIATVVVLVL FTFLAILGIG ESAFVAVIIF VTHIATLSLL VLASIWFILN HGLNVFHINW ETPIAFGSMK TALFLGFSAA MLGISGFESS ANFVEEQQQG VFPKTLRNMW ALVSFFNPVI AILLISVIPL AQVGENKESL LAHLGETTGG SWLAWLISID AVLVLCGAVL TSFVGVSGLL NRMTLDRILP NFFLKQNKRG SHYRIVISFL ILCISVLFAT NGHLESLAGV YTFSFLAVMA LFGIGNLLLK FKRRKLPRPE RAHGLAVFAA VSFIIAAFIG NMKLNINAFY TFLQYMVPAL IFIGIMLNRV MLIKVLIEIL EYFYQPLRKM VILSNRYLQN LSAEINSQEF VFFTKGDNIA ILNKVLQYVE GNETTKKLKI VYVKNDGLIN EALVKDLEVL DRAYDNIDIE YLEIEGVFGP EIIDELSQKW KIPKNFMFIG SPGNKFSYRV SDLGGVRLIM
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