Gene Fjoh_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2680 
Symbol 
ID5090255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp3189624 
End bp3190283 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content31% 
IMG OID644742104 
ProductIS1 transposase 
Protein accessionYP_001195022 
Protein GI146300431 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.364824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AATGTAATTT TTGCAATGGT AAATGCATAA AAAATGGATT ACAATCTAAC 
GGAAATCAGC GTTATAAATG TTGTGCTTGC AAAAAAAGAC AGCAGATTGA ATATAGCTAC 
AACGCTTACA AAAAGGATAT CAATCAGGAA ATAGTGCTGT TCACCAGAGA AGGATTAGGA 
ATAAGAAGCA CGGCAAGAAT ATTGAAAATA TCAGCTACAA CATTACTAAA AAGAATTGTT 
TCAATTGCTA GAAACATTAC CAAGCCAATT ATCAGCAATG GTAAAACTTA TGAAGTCGAT 
GAACTTTGCA CTTATATCAG ACACAAGAAA AATTATATCT GGCTGGTTTA TGCATTGGAA 
AAGAATTCTA AAAATGTGGT GAGTTTTAAT GTAGGCAAAC GAACCAATAA AACTCTGAAT 
CGTGTTTTGG AAACTTTAAA ATTATCTGAC GCTAAGAAAA TATTTACGGA CAGACTTAAA 
AACTACAGGT ATCCGATTGA TGAGAAAATG CATTTTGTTA AACGTTTTGG AACAAATCAT 
ATTGAAAGAA AGAATTTGAC GCTCAGGACT CATTTAAAAA GATTAAACAG ACGTACAATC 
TGCTTTAGTA AAAGTTTAGT GATTTTTACG GCTGTTTTAA AGATTTATTT TTGGATTTGA
 
Protein sequence
MKIKCNFCNG KCIKNGLQSN GNQRYKCCAC KKRQQIEYSY NAYKKDINQE IVLFTREGLG 
IRSTARILKI SATTLLKRIV SIARNITKPI ISNGKTYEVD ELCTYIRHKK NYIWLVYALE 
KNSKNVVSFN VGKRTNKTLN RVLETLKLSD AKKIFTDRLK NYRYPIDEKM HFVKRFGTNH 
IERKNLTLRT HLKRLNRRTI CFSKSLVIFT AVLKIYFWI