Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2671 |
Symbol | |
ID | 5090246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3181733 |
End bp | 3182308 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742095 |
Product | phage integrase family protein |
Protein accession | YP_001195013 |
Protein GI | 146300422 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.196134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAA AAGGACAAAA GACAACAAGT GATTTTTTAG AGTGGAACAA AATGCAGACT ATCGTTTTGA AACTGGAGAG AGACAATGAT TTGAAATTTG CATTGCTGAT TGCAACAGGT TCTTATATTG GTCTGAGGAT TTCTGACCTA CTACAGCTTC GTTGGAATCA GGTTTTGAAT GAGGAGCATT TTATCATTAC GGAAAGGAAA ACCAAGAAAA TCCGAAAAGT GACTATCAAT CCAGAACTGC AAATCATACT TAAAAGATTG TTTGTCCAGC TTGAAGCCAA AGAAACTGAT TTGATGTTTG CCAATAGGTC TGGAGATAAA CCGTTCAGTA CACAGTATGT GAACAGTAAA CTCAAAGATA TATTCACTAA ATACAATGTA AAAGGTCAGT ATTCAAGCCA TTTTATGAGA AAAACGCTAG GTCGCAGAGT CTGGGAAGTA AACAAATATA GTGACCAAGC ATTATTGTTA TTGTCCCAGC TGTTCAATCA TACCAGCGTT TCAACTACTA AAATCTATCT AGGAATCAGA GAACAAGAGA TAAGTAACCT ATATTTGAGC ATATAG
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Protein sequence | MALKGQKTTS DFLEWNKMQT IVLKLERDND LKFALLIATG SYIGLRISDL LQLRWNQVLN EEHFIITERK TKKIRKVTIN PELQIILKRL FVQLEAKETD LMFANRSGDK PFSTQYVNSK LKDIFTKYNV KGQYSSHFMR KTLGRRVWEV NKYSDQALLL LSQLFNHTSV STTKIYLGIR EQEISNLYLS I
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