Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2600 |
Symbol | |
ID | 5093495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3094766 |
End bp | 3096691 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742028 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001194946 |
Protein GI | 146300355 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG ATAATAATCC AAATCCGAGT AAATTTAAAA TAAGTCCCTG GTTAATATAT ACCGCAATAC TTTTAGTTTT TTTATTTATA AGTTTTGCTA CCGGTGGATC TAACTTAAGC GAACCTGCTC AATTAACTTC TTCTAAATTC AACACTTTAT TAGAAAAAGG ACAAATTGAA AAAGTTATCG TTTATAATAA AGCTGAAGCT GAGGTATACT TAAATGCTGC CGCACTTAAA GACCCGGCTA ATAAAAAAGT TGCAAAAGAT ATTTTTGACA GAGCTAACAA AGGCCCTCAC TATACTTTAG AAATTGGTAA CGACCAGATT TTTCAAACTA AACTTGAAAA AGCGGTTAAC GAAGGAAAAT TAAAAGACTT CAATTTCATC CAGAAAAATA ACTGGAGCGA TATTTTAATC AGCTTACTTC CTATCATCAT CATTATTGGT GTATGGATTT TCATTATGCG TAAAATGTCT GGCGGAGGCG CTGGCGGAGG CGGACAGATT TTCAATATCG GAAAATCGAA AGCTAAACTT TTTGATGAAA AAACAGATAT CAAAACTACT TTTAAAGATG TAGCTGGTTT AGAAGGTGCA AAAGAAGAAA TTCAGGAAAT TGTAGAATTC CTTAAAAACC CTGAAAAATA TACAAATCTT GGAGGTAAAA TTCCTAAAGG AGCTTTACTT GTAGGACCTC CGGGAACTGG TAAAACCTTA TTAGCTAAAG CTGTTGCCGG CGAAGCACAA GTGCCTTTCT TCTCGTTATC AGGTTCTGAT TTCGTAGAGA TGTTTGTGGG AGTTGGAGCA TCACGTGTAC GTGATTTGTT TAAACAGGCA AAAGAAAAAT CTCCTGCTAT TATTTTCATC GACGAGATCG ATGCAGTTGG TAGAGCAAGA GGAAAAAGTA ATATGTCTGG CGGAAACGAC GAAAGAGAAA ACACTTTGAA CCAGTTACTA ACAGAAATGG ACGGTTTTGG TACAAACTCT AACGTAATTG TTTTAGCTGC AACAAACAGA GCCGACGTTC TTGACAAAGC TTTAATGCGT GCAGGACGTT TTGACAGACA AATTTTTGTT GACTTACCAG ACATTCGCGA AAGAGCTGAA ATTTTTAAAG TTCACTTAGC TCCTATTAAA AAAGTTGAAG GTCTTGATCT TGATTTCTTA GCTAAACAAA CTCCGGGATT CTCTGGTGCT GATATTGCTA ACGTTTGTAA CGAAGCTGCA CTTATCGCGG CACGTAATAA CAAACCTGCT GTAGACAAAC AAGATTTTCT TGATGCTGTT GACAGAATTA TTGGCGGTCT TGAAAAGAAA AATAAAATCA TTACTCCAGA AGAGAAAAGA GCAATTGCAA TTCACGAAGC GGGTCACGCA ACTGTAAGCT GGATGTTAGA GCACGCTGCA CCGCTTATTA AAGTAACAAT TGTTCCTCGC GGACAAAGTT TAGGAGCTGC ATGGTATTTA CCAGAAGAAA GACAAATCGT AAGAACAGAC CAAATGCTTG ACGAAATGTG TGCAACTATG GGCGGAAGAG CTGCAGAAAA AGTAACTTTT GACAGAATTT CGACTGGAGC ATTAAGCGAT TTAGAAAAAG TAACGCGTCA GGCTCGTGCT ATGGTAACCA TTTACGGTTT AAATGATAAA ATTGGAAACG TTACTTATTA CGATTCAACA GGACAAAGCG AATATAATTT CTCTAAACCT TATTCTGATG AAACAGCAAA AATTATTGAT GCTGAAATTT CAGAATTAAT TGAAGGCCAA TACCAGAGAG CAATTGAAAT TCTTGAAGAA AATAAAGATA AATTAAATCA GCTTGCTGAT ATCTTAATCG AAAAAGAAGT AATCTTTAAA GATGATCTTG AAACAATTTT CGGAAAACGT ACCTGGGATA AAAATTTAGA AGAGGTCGTT TCGTAA
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Protein sequence | MAKDNNPNPS KFKISPWLIY TAILLVFLFI SFATGGSNLS EPAQLTSSKF NTLLEKGQIE KVIVYNKAEA EVYLNAAALK DPANKKVAKD IFDRANKGPH YTLEIGNDQI FQTKLEKAVN EGKLKDFNFI QKNNWSDILI SLLPIIIIIG VWIFIMRKMS GGGAGGGGQI FNIGKSKAKL FDEKTDIKTT FKDVAGLEGA KEEIQEIVEF LKNPEKYTNL GGKIPKGALL VGPPGTGKTL LAKAVAGEAQ VPFFSLSGSD FVEMFVGVGA SRVRDLFKQA KEKSPAIIFI DEIDAVGRAR GKSNMSGGND ERENTLNQLL TEMDGFGTNS NVIVLAATNR ADVLDKALMR AGRFDRQIFV DLPDIRERAE IFKVHLAPIK KVEGLDLDFL AKQTPGFSGA DIANVCNEAA LIAARNNKPA VDKQDFLDAV DRIIGGLEKK NKIITPEEKR AIAIHEAGHA TVSWMLEHAA PLIKVTIVPR GQSLGAAWYL PEERQIVRTD QMLDEMCATM GGRAAEKVTF DRISTGALSD LEKVTRQARA MVTIYGLNDK IGNVTYYDST GQSEYNFSKP YSDETAKIID AEISELIEGQ YQRAIEILEE NKDKLNQLAD ILIEKEVIFK DDLETIFGKR TWDKNLEEVV S
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