| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2585 |
|---|
| Symbol | |
|---|
| ID | 5091099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 3078368 |
|---|
| End bp | 3079642 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644742013 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001194931 |
|---|
| Protein GI | 146300340 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.508719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA AATATGTTAT ACTAGCATCA GCATTACTGA TTTCTGTAGC TACATTTGCT
CAAAAAGATC AAATTAAAAA TGCAGAAAAA GCGTTAAAAA GCGGTGATGC ACAAGGAGCT
CTTGCACAAT TAAAAGATGC AGAGAACTTA ATTGTAAATG CAAAAGATAC TGAGCAGGCA
CAGTACTATT TCGTACAAGG AAATGCTTAT TTAGACCTTG CAAACAAAAA AGTTGAAGAA
AGCAAAAATT TAAGTGCTGC TGCTGACAGC TACAAAAAAT TAATTGATGT TGAAAAAGCT
TCTGGAAAAC AGAAATATTC AACTCAGGCT GCAGCATCTA TCACAAACAT CAAAGGATTA
TTAATTAATT CTGCTATTGC TGATACTCAG GCTAACAAGC ATTCAGAAGG AGCTAAGAAA
TTGTATGATG CTTATTTGTT AGACAAAAAC GATACAATTA ATCTTTATTA TGCAGCTTCT
ACAGCTGTAA ACGCTCAGGA TTTTGATACT GCGCTTCCTA TGTACGAAGA GTTAAAAAAA
TTAAACTATT CTGGAAAAGG AACTTTATAC TTAGCTGTAA ACAAAGCAAA TAATAACGAA
GATAACTTCG CTAATGCAAA AGAAAGAGAT TTAGCTGTAA AATTAGGAAC TCACGAAAAA
CCTAAAACAG AAGCTATTCC TTCAAAAAGA GGAGAAATCT ACAAAAACCT GGCTTTGATT
TTAGTTCAAA AAGGAAAAAT TGAAGAAGCT AAGAAAGCAA TTGCAGATGC AAGAAAAACA
AATCCAGATG ACAGCTCTTT AATTCTTACT GAAGCTAATT TATATCTTGA AACAAAAGAC
TACGATCAGT ACAAAAAATT AGTTGGAGAG GCTTTACAAA AAGACCCAAA CAATGCTGAT
TTAGTATTTA ATTTAGGTGT ATTGAGTGCA AATGCAAAAA ACAATGCTGA TGCTGAGAAA
TACTACTTAA AAGCAATCGA AATTAACCCT AACTACACAA ATGCTTATTT AAATCTTGCT
GCATTAAAAT TAGAAGCTGA GAAACCAATC ATTGATGAAA TGAACAAATT AGGTACATCA
GCTAAAGATA TGAAGCGTTA CGATGTATTA AAAGCACAAA GAGAAGATGT TTTTAAAGGT
GTTATCCCTT ACCTTAAAAA AGCAAATGAG TTAGATCCTA AAAATGATGA TGTTGCAAAA
ACATTATTAG GGGTTTACAA AGCGTTAGAA ATGACAGCTG AGGCAAAAGC TCTAAAAGCT
ACAATGAACC AATAA
|
|---|
| Protein sequence | MKSKYVILAS ALLISVATFA QKDQIKNAEK ALKSGDAQGA LAQLKDAENL IVNAKDTEQA
QYYFVQGNAY LDLANKKVEE SKNLSAAADS YKKLIDVEKA SGKQKYSTQA AASITNIKGL
LINSAIADTQ ANKHSEGAKK LYDAYLLDKN DTINLYYAAS TAVNAQDFDT ALPMYEELKK
LNYSGKGTLY LAVNKANNNE DNFANAKERD LAVKLGTHEK PKTEAIPSKR GEIYKNLALI
LVQKGKIEEA KKAIADARKT NPDDSSLILT EANLYLETKD YDQYKKLVGE ALQKDPNNAD
LVFNLGVLSA NAKNNADAEK YYLKAIEINP NYTNAYLNLA ALKLEAEKPI IDEMNKLGTS
AKDMKRYDVL KAQREDVFKG VIPYLKKANE LDPKNDDVAK TLLGVYKALE MTAEAKALKA
TMNQ
|
|---|
| |