Gene Fjoh_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2560 
Symbol 
ID5091074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3045230 
End bp3045943 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content35% 
IMG OID644741988 
Producthypothetical protein 
Protein accessionYP_001194906 
Protein GI146300315 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAG CGTTCGAATT TAGAAAAGGA AGAAAAATGA AACGTTGGTC TGCAATGGCC 
AAAACATTTA CCAGAATTGG TAAAGACATC GTTATGGCTG TTAAAGAAGG CGGTCCTAAC
CCTGACGCCA ATTCTAGATT AAGAGCTGTT ATACAAAACG CGAAAGCAGC CAACATGCCA
AAAGACAATG TTGAGCGTGC AATAAAAAAT GCAAGTAACA AAGATACTGC AAACTATAAA
GAGATTTTAT TTGAAGGATA TGCTCCTCAT GGAATTGCTA TTTTGATCGA AACTGCATCT
GATAACAATA ACAGAACAGT AGCAAACATT AGAAGCTATT TTAATAAATG CAACGGTACA
ATGGGAACTC AGGGTTCTGT TGAATTTATG TTCGATCATA CTTGTAATTT CAGAATTGCA
AAAGATGGCA TCGATGCTGA AGAATTAGAA CTTGAATTAA TTGATTTTGG TGCCGAAGAA
GTTTTTGAAG ACGAAGATGG AATCTTGATC TACGCTCCTT TTGGAAGTTT TGGTGCTTTA
CAAAAAGAAT TAGAAAACAG AGGTCTTGAA ATTTTATCTT CTGGTTTTGA GCGCATTCCT
CAAATCACAA AAGAATTAAC AGAAGCCCAA ATCGCTGATG TTGAAAAATT AATCGAAAAA
ATCGAAGAAG ATGATGACGT TATGAACGTT TATCATACTA TGAAAGAAGA ATAG
 
Protein sequence
MGRAFEFRKG RKMKRWSAMA KTFTRIGKDI VMAVKEGGPN PDANSRLRAV IQNAKAANMP 
KDNVERAIKN ASNKDTANYK EILFEGYAPH GIAILIETAS DNNNRTVANI RSYFNKCNGT
MGTQGSVEFM FDHTCNFRIA KDGIDAEELE LELIDFGAEE VFEDEDGILI YAPFGSFGAL
QKELENRGLE ILSSGFERIP QITKELTEAQ IADVEKLIEK IEEDDDVMNV YHTMKEE