Gene Fjoh_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2547 
Symbol 
ID5091061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp3032460 
End bp3033050 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content30% 
IMG OID644741975 
ProductTetR family transcriptional regulator 
Protein accessionYP_001194893 
Protein GI146300302 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.28213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG CTGCCAATAC CCGACTTACT ATTCTTCATA AAGCATTTGA ATTGATATAC 
ACTAAAGGAT ATCAAACTAC TAGTGTTGAT GAAATTATTG CAACTACTCA AGTTACAAAA 
GGAGCTTTTT ATTATCATTT TAAAAATAAA GATGAAATGG GAGTTGCAAT TATAGAAGAA 
ATTCTAAAGC CGACAATGCA GGAACATTTT ATAAAACCAA CTGAAGTTTC TCAAAATCCA 
ATAGAAGATT TTTATAATAT GATTTCATAT CTGTTATTAG AAGATCCTTT TTTGCAGGTA 
AAATATGGCT GTCCGGTTGG AAATCTTACT CAGGAAATGA CGCCCTGGAA TACTAAGTTT 
AGCGAAGCTT TGACTGAATT AGTCAATTTA TGGAAAACTA CAATTATAAA TTCAATTGAA 
AAAGGTAAAG AATCTGGTTT GATTCGCAAA GATGTTATTG GTGAACAAGT AGCTTTTTTT 
ATCCTTTCAG GCTATTGGGG AATACGAAAT TTTGGAAAAC TTCAAAATGA TAATTCAGTA 
TATCTTATTT ATTTAGAAGA GCTTAAGAAA TATTTGGACG GTTTGAAATA A
 
Protein sequence
MSKAANTRLT ILHKAFELIY TKGYQTTSVD EIIATTQVTK GAFYYHFKNK DEMGVAIIEE 
ILKPTMQEHF IKPTEVSQNP IEDFYNMISY LLLEDPFLQV KYGCPVGNLT QEMTPWNTKF 
SEALTELVNL WKTTIINSIE KGKESGLIRK DVIGEQVAFF ILSGYWGIRN FGKLQNDNSV 
YLIYLEELKK YLDGLK