Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2486 |
Symbol | |
ID | 5091940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2975164 |
End bp | 2975736 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644741914 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001194832 |
Protein GI | 146300241 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000657605 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA TAATTCACAT TCAGAAAACA TTTGAGAAAG TTGTTTATAT CGATAAAAGA ATAAACAACA GGGAATTTGA AGACTGTGTG TTTAAAAACT GTGATTTTTC GAATAGTAAT TTCGGCTCTA ATACATTTTT GGACTGTGAA TTTATTGACT GTAACTTATC TATGACAACT CTAGCCGGAA CGAGTTTAAA AAATGTGAGT TTTAGGAACT GTAAACTTCT GGGAATTGCT TTTAATGAAT GTGATGATTT CTTATTTCAG GTTCATTTTG AAGACTGCAC TTTAGATTAT GCTGTTTTTT CAAATAAAAA AATGCCAAAA ACAAAATTCA TCAATTCTTC GGTGCGTGAA GTAACTTTTA TTGGCACTAA TTTAACAAGC TCTGTTTTTG ACAATTGTAA TCTTGACGGT GCAATTTTTA ATGAAACCCA ATTGGCAGGT GTCAATTTTA AAACAGCTTA TAATTATAAA ATCGATCCAG AATTCAACCC AATGAGAAAA GCACAATTTT CTACAGAGGG AATTGTTGGA CTTTTAGATA AATACGATAT TAAGATCGTA TAA
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Protein sequence | MEEIIHIQKT FEKVVYIDKR INNREFEDCV FKNCDFSNSN FGSNTFLDCE FIDCNLSMTT LAGTSLKNVS FRNCKLLGIA FNECDDFLFQ VHFEDCTLDY AVFSNKKMPK TKFINSSVRE VTFIGTNLTS SVFDNCNLDG AIFNETQLAG VNFKTAYNYK IDPEFNPMRK AQFSTEGIVG LLDKYDIKIV
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