| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2246 |
|---|
| Symbol | |
|---|
| ID | 5092252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2701522 |
|---|
| End bp | 2704536 |
|---|
| Gene Length | 3015 bp |
|---|
| Protein Length | 1004 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644741675 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001194593 |
|---|
| Protein GI | 146300002 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGAC TTTCCTGGTT CTTTTTATTC CAAATTATCC TTACTTCGAC TATAGCTTCG
GCACAAAAAT CAGCTATTTA TACTTACGAA TTAAAGGATT TTGACAAAGC ACTGGCTTTA
TATAATGACA AACAATACGC TTCGGCACAA CATATTTTTG AGTATGTAAA AAATAACGCA
GCAACTGAAG AAGTAAAATC AGACTGTGCT TATTATATCG CAAATTGTGC AATTAGAACC
AATCAGGCAA ATGCCGATGC TTTGATGGAA AAATTCGTAG AAGATTACCC AACAAGCACC
AAACAAAATC AGGCATACAT TGAAGTGGCA CAGTATTTCT TTGAGCAAGG AAATTATCCA
AAAGCTTTGC AGTGGTTTGA CAAAGTAGAT GAAAGCTACA TGAGTAAAAA AGAATCGGAT
AAATTTAATT TCCAGAAAGG ATACAGTTAT TTTAATGCTA AAAAGAAAAA AGAAGCCACA
ACGTATTTTA ATAAAGTCGT AAACTCTCCA GAATACGGTT CGCAGGCCAA ATATTATTTA
GGATTTATGG CGTATGAAGG CGACGATTAC AAAGAAGCAA CGAAGTATTT TGATGAGGTT
TCGGGCGAAG AAAAATACAA AGAGAAACTT TCGTACTATC AGGCTGATAT GAATTTTAAA
TTAGGAAATT TCCAAAAAGC AATTGATTTA GGCCAAAAAG CGATGGCGAA ATCAAATGAA
ATGGAAAAAT CAGAATTGAA TAAAATTATT GGTGAAAGTT ATTTTAATTT AAAACAATAC
GATAAAGCAA TTCCGTATTT AGAGCAGTAC GCAGGAAAAA AGGGAAAATG GAATAATACC
GATTTCTATC AGTTAGGTTA TGCGTATTAC GAGCAGAAAA ATTACGAAAA AGCGATTTCT
CAATTCAATA AAATTATTGA AGGAAAAGAT TTCGTAGCTC AAAATGCCTA TTATCATTTA
GGTTTAAGTT ATTTAAATAC AGGTAAAAAA CAAGAAGCTT TAAATGCATT TAAGAATGCA
TCAGAAATGG ATTTTAATGC ACAAATTCAG GAAGATGCTG CTTTAAATTA TGCTAAAGTG
AGTTATGATA TTGGAAACGC ATATCAAACC GTTCCGGGAA TTTTACTTGA TTTCTTAAAA
AAATATCCAA ACAATTCAAA CAGGGCAGAA GTAGAAAAAC TTTTAGTTGA CTCTTATATT
TCGACTAAAA ACTACAAAGA AGCTTTAGCA TTATTAGAAA AAAACAGAAC TGCCGAAAAT
AAAGCGGCGT ATCAAAAAGT ACTTTTTTAT AGAGGAGTTG AATTGTACAA TGAATTGAAT
TATACTGAAG CCGGAAAAAT GTTTAAAAGT GCTGCAAGCG AACAAAAAAC GCCTGAATTT
ACTGCACGCG CTACATTCTG GAAAGCTGAA ACGGAATATC TTAATGACGA TATGCAGAAT
GCATTGCTGA CCTACAAACA ATTTGCGGGA CTTCCGGCTG CAAAATCTAC AGACGAATAC
AAAAACATCA ATTACAATAT TGGTTACACG TATTTTAAAT TGAAAGAATA CGATCAGGCT
GCTAATTCAT TTCAGGCACA GATTGACAAT AATAAAGAAG ATAAAGTACG TTTAAATGAT
TCGTACCTGC GTTTAGGAGA TTCACGTTTT GTGAATTCTA AATACACACA GGCAATGGAA
GCGTATGGAA AAGCAATGGA CGGAAAAAGT GTCGATGCTG ATTATGCTCA GTTTCAAAAA
GCACTTTCAT ACGGTTTTAT GTCTAAAAAT GATCAGAAAA TCAGTGAGTT GAACAATTTC
CTGAAAATGT ATAAAAAATC AGAATACCGC GATGATGTTT TATTTGAATT AGGAAATACG
TATGTAGCTG ATAAAAAGAA TGATTTAGCG ATCAAAACTT ACGATCAGTT AATTTCAGAA
TACAAAAATG GTTCGTTTAC CTCAAAATCA ATCTTAAAAC AAGGTTTGAT TTATTACAAT
TCAGATCGTG ACGAACAGGC ATTGGCAAAA TTCAAAAAAG TAGCGGCTGA GTTCCCAAAA
ACGCCGGAAG CTCTTGAAGC TGTTTCTACA GCCAGATTAA TTTATGTTGA TTCAGGAAGA
GTAGATGAAT ATGCATCATG GGTTAAAACT TTAGATTTCG TTTCGGTTAC AGATGCAGAA
CTCGATAATG ATACTTACGA TGCTGCGTTT AAACAATACA GCCAAAGCAA CAGCAAAGCT
GCAATTACAG GTTTTGCAGG TTATATAAGC AAATTCCCTG CTGGTTTACA CGCTTTAGAA
GCTAATTTTT ACTTAGCACA ATTATATTAT GCAGAAGGTT CTGAAACTAA ATCAGTTTCT
AATTACCAAT ATGTAATCGA ACAGCCAAGA AGTGAATTTA CAGAGCAGGC GCTAAACAGA
CTGGCTCAGA TTTATTTAAA AGCAAAAGAT TGTGATAAAG CAATTCCGGT TTTAGTTCGT
TTAGAAAGTG AAGCAGATTA TCCTCAAAAT AAAAACTTTG CTCAGGCTAA CCTGATGAAA
TGTTATTATG ATAAAAAAGA CTATGATAAA TCAGTAATTG CGGCTGAAAA AGTATTAGCA
AATCCTAAAT CTGATGCCAA CGTAAAAGCC GATGCACAAA TTATTGTAGC ACGTGCGGCT
ATTCAAACAG GAGAAGAAGA CAAAGCTAAA GCAGCGTATG CAAAATTGTC TACAACTTCA
AAAGGAGAAT TAGCAGCCGA AGCATTGTAT TATGATGCTT ACTTTAAAAC AAAAGAAGGG
AAATTTGAAG CATCAAATAC TGCGGTTCAA AAACTGGCCA AAAGTTATTC TGCTTACAAA
TATTACGGAG CAAAAGGTTT GGTTTTAATG GCGAAAAACT TCTACGGTTT AAAAGACAGC
TATCAGGCAA CTTATATTTT AGATAACGTG ATTAACAACT TTACAGATTA TCCGGATGTG
GTTGATGAAG CTAAAAAAGA GTTAAGTGCG ATTAAATTAG AAGAGTCTAA AACAAATTCA
TCAATTAATA AATAA
|
|---|
| Protein sequence | MHRLSWFFLF QIILTSTIAS AQKSAIYTYE LKDFDKALAL YNDKQYASAQ HIFEYVKNNA
ATEEVKSDCA YYIANCAIRT NQANADALME KFVEDYPTST KQNQAYIEVA QYFFEQGNYP
KALQWFDKVD ESYMSKKESD KFNFQKGYSY FNAKKKKEAT TYFNKVVNSP EYGSQAKYYL
GFMAYEGDDY KEATKYFDEV SGEEKYKEKL SYYQADMNFK LGNFQKAIDL GQKAMAKSNE
MEKSELNKII GESYFNLKQY DKAIPYLEQY AGKKGKWNNT DFYQLGYAYY EQKNYEKAIS
QFNKIIEGKD FVAQNAYYHL GLSYLNTGKK QEALNAFKNA SEMDFNAQIQ EDAALNYAKV
SYDIGNAYQT VPGILLDFLK KYPNNSNRAE VEKLLVDSYI STKNYKEALA LLEKNRTAEN
KAAYQKVLFY RGVELYNELN YTEAGKMFKS AASEQKTPEF TARATFWKAE TEYLNDDMQN
ALLTYKQFAG LPAAKSTDEY KNINYNIGYT YFKLKEYDQA ANSFQAQIDN NKEDKVRLND
SYLRLGDSRF VNSKYTQAME AYGKAMDGKS VDADYAQFQK ALSYGFMSKN DQKISELNNF
LKMYKKSEYR DDVLFELGNT YVADKKNDLA IKTYDQLISE YKNGSFTSKS ILKQGLIYYN
SDRDEQALAK FKKVAAEFPK TPEALEAVST ARLIYVDSGR VDEYASWVKT LDFVSVTDAE
LDNDTYDAAF KQYSQSNSKA AITGFAGYIS KFPAGLHALE ANFYLAQLYY AEGSETKSVS
NYQYVIEQPR SEFTEQALNR LAQIYLKAKD CDKAIPVLVR LESEADYPQN KNFAQANLMK
CYYDKKDYDK SVIAAEKVLA NPKSDANVKA DAQIIVARAA IQTGEEDKAK AAYAKLSTTS
KGELAAEALY YDAYFKTKEG KFEASNTAVQ KLAKSYSAYK YYGAKGLVLM AKNFYGLKDS
YQATYILDNV INNFTDYPDV VDEAKKELSA IKLEESKTNS SINK
|
|---|
| |