Gene Fjoh_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2083 
Symbol 
ID5092096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2471180 
End bp2471848 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content30% 
IMG OID644741507 
Productresponse regulator receiver protein 
Protein accessionYP_001194432 
Protein GI146299841 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0128449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTAA ATGTTCTAGT GGTAGACGAC CATCCTATGA CAGTGGATAG TTATATAAAC 
CTATTATCTG ATGAAGAATT TCAAACAACA AAGCCTAATT TTATTACCAG TTACAATTGT
GAAGACGCTT ACAATAAAAT AACGCTTATG TCAAAGCAGG ACAAGAATAT TGATTTTGCT
TTATTAGATA TTAACCTTCC GCCTTACAAA AAACTTAATA TTAGTAATGG TATTGATCTT
GCACTACTCG TTAGAGGGAA ATTTAAAAAC TGTAAGATAG TTTTACTTAC AATGCATAGT
GAGCCATTGA CAGTCGATAA GATCATCAAA AGTGTAAGAC CAGAAGGCTT TATATCTAAA
AGTGATATTA ATTTTGAACT ATTTCCTGTT TTCTGTAAAA GAATATTAAA TGGAGAAATA
CTGCAAAGCA CAGCCATAAT AGAATCACAG AGAGACTTAT TCAAAAAAAA TATAAATTGG
GATAATCATG ATAACCAAAT CTTAATTTTA ATTTCTCAAG GTGTAAAAAC GGTAAATCTT
CCAGATTATA TTCCGCTTTC TATGAGTGCC ATCGAAAAAA GAAAAGCCAG TATAAAAGAC
CAGCTTTTAA AAGAAAAAGG CAGTGATAAA GATTTAATTG AAAAAGCAAA AAAGCTGGGA
CTGCTTTAA
 
Protein sequence
MSLNVLVVDD HPMTVDSYIN LLSDEEFQTT KPNFITSYNC EDAYNKITLM SKQDKNIDFA 
LLDINLPPYK KLNISNGIDL ALLVRGKFKN CKIVLLTMHS EPLTVDKIIK SVRPEGFISK
SDINFELFPV FCKRILNGEI LQSTAIIESQ RDLFKKNINW DNHDNQILIL ISQGVKTVNL
PDYIPLSMSA IEKRKASIKD QLLKEKGSDK DLIEKAKKLG LL