Gene Fjoh_2033 details

Gene Information

• Locus tag: Fjoh_2033
• ID: 5092047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 2387824
• End bp: 2389701
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644741458
• Product: Na+/solute symporter
• Protein accession: YP_001194383
• Protein GI: 146299792
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0591] Na+/proline symporter

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTA TTGACGTATC GATAATCGTA GCTTACATTC TGCTCTCGGT GAGTATCGGA 
ATTTGGATTT CAAGAAAAGC AAAACAAGGA TTAGATGATT ATTTTCTTGG AGGAAAAACA 
ATCAAATGGT ATTTTTTAGG TCTAAGTAAC GGATCTGGAA TGTTTGATGT TTCCGGAACT 
TCCTGGATGA TTGGCGTACT TTTTCTGTAT GGTGTAAAAA GCTTTATGTT CATGTGGTTG 
TGGCCAATCT GGAACCAGAT TTTTGTAATG ATGTTCCTTG CGGTCTGGAT TAGAAGATCA 
AAAGTAATGA CAGGTTCTGA GTGGATTTTA ACCCGTTTTG GAAGTGACAG AGCCGGAAAA 
GCATCGCATA TTATTGTGGC TATTTTTGCT ATTATTTCTA CAATTGGTTT TATCGCTTAT 
TTCTTTGAAG GAATTGGAAA ATTTGTAACC ATTATTCTTC CGTGGGATTT AACGCTTCAT 
TACGGAGATA TGATTTTATT GACTTCTGAA CGTTCTTATG CGTTGTTAAT CATCTTTTTA 
ACTACAATTT ATACTGTAAA AGGCGGGATG TTCTCGGTAG TAGCGACAGA AGTGGTGCAA 
TATTTAATTA TGATTGTAGC CGGAGTTTTA ATTGCCGGAT ATGCATTTAT TAATTATACT 
GATATTCAGA TTAATTCGAT TATTACGCCA GAATGGAAAA ATGTTTTCTT TGGCTGGCAG 
TTTGAAACCC AATGGAGTGA TAAATTCCTA ACCTTCAATA ATTTAATTGA TTCTGAAGGT 
TATAAAATGT TTGGCGCTTT CATCGGGATG ACATTGTTTA AAGGGTTTTT TGCGAGTGTT 
GCCGGGCCAA CGCCAAGTTA TGATTTACAA AGAGTTCTTT CTACAAAATC GGTTAAAGAA 
GCTGCTTATA TGAGTGGTTT CACAAACTTA ATTTTATTCA TTCCTAGATA TTTATTAATT 
ACAGGAATCG TAGTAATTGC GCTGGTAAAC TTAGCTCCAG AATTAAATGC AAATACTGGT 
TTAACCGGAG CCGATCTGGA ATTATTAATG CCAAAAGTGG TCAATTTATA TATCCCGGTT 
GGAATTAAAG GAATTCTTTT AGCAGGTTTA TTAGCCGCTT TTATGTCTGG ATTCTCAGCT 
TTCGTAAATG CTGGACCAGC TTATATCGTA AACGATATTT ATAAAAAATA CTTTAAACCA 
GTTGCATCTA ATGCACATTA TATTAAAGTA AGTCAGATTT CTTCTTTCCT TGTAGTTGGT 
TTAGGTGTTT TTATGGGATT CTTTGCAGAC TCAATCAACT CTTTAACCCT TTGGATTACA 
AGTGCTTTGT ACGGAGGTTA TGTAGCAGCC AATTTCCTAA AATGGATTTG GTGGCGTTTT 
AATGGCTGGG GGTATTTCTG GGGAATGTTC GCCGGATTAA TTGTCGCTTC ATTACAATTT 
GCTTTGGGTC AGGCCAAAGG AAGTTTAACC GAAGGTTCAT TCTTATATGA TTTAGCACAA 
GTACAGGCAA TTTATTTGTT TCCGTTAATA TTTGGTTTCT CAATTTTAGG ATGTCTGTTA 
GGAACGTTCT TAAGTAAACC AACGGATATG GAAGTTTTAA AATCATTCTA TTCAAATGTT 
AGACCTTGGG GATTCTGGGC CCCGGTTTAT AAACAATTAA AAGTTGAAGA CTATACTTTC 
GAGAAAAATA ATGATTTCTG GAGAGATATG ATGAACTGCG CAATTGGAAT TATCTGGCAG 
TCAAGTATGA TTCTGCTTCC AATATTCTTC ATCATCAGAG ATTATCCAAA AGCAATTACG 
GCTTTGATTG TGTTTTTAGT AACGACTACG ATATTGAAGT TTACGTGGTT AGATAAGGTT 
AGAAAAATTG AAGATTAG 

 

Protein sequence

MDIIDVSIIV AYILLSVSIG IWISRKAKQG LDDYFLGGKT IKWYFLGLSN GSGMFDVSGT 
SWMIGVLFLY GVKSFMFMWL WPIWNQIFVM MFLAVWIRRS KVMTGSEWIL TRFGSDRAGK 
ASHIIVAIFA IISTIGFIAY FFEGIGKFVT IILPWDLTLH YGDMILLTSE RSYALLIIFL 
TTIYTVKGGM FSVVATEVVQ YLIMIVAGVL IAGYAFINYT DIQINSIITP EWKNVFFGWQ 
FETQWSDKFL TFNNLIDSEG YKMFGAFIGM TLFKGFFASV AGPTPSYDLQ RVLSTKSVKE 
AAYMSGFTNL ILFIPRYLLI TGIVVIALVN LAPELNANTG LTGADLELLM PKVVNLYIPV 
GIKGILLAGL LAAFMSGFSA FVNAGPAYIV NDIYKKYFKP VASNAHYIKV SQISSFLVVG 
LGVFMGFFAD SINSLTLWIT SALYGGYVAA NFLKWIWWRF NGWGYFWGMF AGLIVASLQF 
ALGQAKGSLT EGSFLYDLAQ VQAIYLFPLI FGFSILGCLL GTFLSKPTDM EVLKSFYSNV 
RPWGFWAPVY KQLKVEDYTF EKNNDFWRDM MNCAIGIIWQ SSMILLPIFF IIRDYPKAIT 
ALIVFLVTTT ILKFTWLDKV RKIED