| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1948 |
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| Symbol | |
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| ID | 5091684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2255093 |
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| End bp | 2256532 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741369 |
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| Product | cytoplasmic alpha-amylase |
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| Protein accession | YP_001194299 |
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| Protein GI | 146299708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.581984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC CTATTGCAAG ATTGTGTTTT GTTATGGCAC TTACAGGATT GTTGTACTCT
TGTTCGCAAA ACGAAACAAA CGATGTTGAT TCAAAAGCAG AAAGTCAGCA GTTTAAAATC
ATTAATGTCA CGCATCACGA CGGAAAGCCT TTCAGTACAG GAAAATCTTC TTCTCTAACT
GGAAAATATG TTGATAACCC AGGTGGAGGT GTTATGATGC AGGCCTTTTA TTGGGATGTA
CCCGCTGGAG GAACTTGGTG GGATACTGTA AAAGGAAAAG TAACTGCTTG GGGAAATGCC
GGAATTGGTT CTATTTGGCT CCCACCTGCT TCAAAAGCTC AAAATGGAGC ATTCTCTATG
GGATATGATC CTACTGATTA TTTTGATTTT GGAGATTATA ATCAAAACGG AAGCACTGAA
ACACGATTTG GATCAAAAGC TGAATTAGTA AGTTTAATTA CAGCTGCCCA TAATGAGAAT
ATCAAAGTTT ATGCAGATAT CGTAATCAAT CATAACAGCG GCGGACAATC TGAAGCAAAT
CCATTTACAG GAACAAATAC CTGGACTAAT TTTACAGGAG TTGCTTCGGG TAAATTCCCT
CGTAACTATA ATGATTTTTA TAAAAACAGT TACGGAAATA ATGACGAAGG TTCTTTTGGA
GGGTTTCCTG ATTTATGCCA CGCTGCACCT AACGTTCAGA ACTGGCTGTG GCTGCGTGCT
GACGGAGTTG GTAAATATTA TAAAAACACA ATGAAGTTTG ACGGCTGGAG ATTCGACTAT
GTAAAAGGCT TTGGTGCATG GGTTGTAAAT GCATGGAATT CGAATGTTGG AGGATTTTCT
GTTGGAGAAT TATGGGATTC GAATGTAAAT GTATTAAATG ACTGGGCAAA CAATGCGAAT
AGTTCTGTAT TTGATTTTGC ATGTTATTAT AAAATGAACG ATGCCTTTGA CGGAAATAAT
CTGGCATTAT TAAATGATGA TATGATGTGG AAACGCAATC CGTACAAAGC AGTAACTTTT
GTAACCAATC ATGATACTGA CGAAATCTGG AGCAAAATGT TAGCTTACTC CTATATATTA
ACTCACGAAG GTTATCCAAC AATTTTTTAT AGAGATTATG AAGAATGGTT AGACAAGAAC
AAACTTAATA ATCTAATCTG GATTCACAAC AATAAAGCAA CTGGAACAAC TTCTATTTTA
TATTCAGACA ATGATGAATA TGTTGCCAGA AGAAACGGAT ACAACGGAAA TCCCGGATTG
GTTGTTTACA TAAACAATTC TGACTCGTGG CAGGAAAGAT GGATTCAAAC CAATTGGGCA
AATACTCAAA TTAAAGATTT TACAGGAAAC TCATCTTGGT ATCCAACTAC TCAAGCTGAC
AAATGGGTAA AAATACAATG TCCTCCAAGA GGATATTCAA TTTGGTCAAT TAATCAGTAA
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| Protein sequence | MKKPIARLCF VMALTGLLYS CSQNETNDVD SKAESQQFKI INVTHHDGKP FSTGKSSSLT
GKYVDNPGGG VMMQAFYWDV PAGGTWWDTV KGKVTAWGNA GIGSIWLPPA SKAQNGAFSM
GYDPTDYFDF GDYNQNGSTE TRFGSKAELV SLITAAHNEN IKVYADIVIN HNSGGQSEAN
PFTGTNTWTN FTGVASGKFP RNYNDFYKNS YGNNDEGSFG GFPDLCHAAP NVQNWLWLRA
DGVGKYYKNT MKFDGWRFDY VKGFGAWVVN AWNSNVGGFS VGELWDSNVN VLNDWANNAN
SSVFDFACYY KMNDAFDGNN LALLNDDMMW KRNPYKAVTF VTNHDTDEIW SKMLAYSYIL
THEGYPTIFY RDYEEWLDKN KLNNLIWIHN NKATGTTSIL YSDNDEYVAR RNGYNGNPGL
VVYINNSDSW QERWIQTNWA NTQIKDFTGN SSWYPTTQAD KWVKIQCPPR GYSIWSINQ
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