Gene Fjoh_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1858 
Symbol 
ID5091483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2142090 
End bp2143163 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content35% 
IMG OID644741272 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001194209 
Protein GI146299618 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.20537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATT ATTTAATCGT CGGATCTGGA TTAGCCGGAA TTTCCTTTGC TGAAATCGCC 
CTTAAAAACA ATAAATCTAT TTTAGTTGTT GATGACAAAT CCCAAAATTC TTCGAGAATT
GCAGGAGGCT TGTACAATCC GGTTATCTTA AAACGTTTTA GTGAAGTCTG GAATGCAAAA
GAGCATTTGG TTTTAATGAA TGAATTCTAT GAACAAGTTG AAGGAAAGCT GCAGGAAAAA
TTCAATTTTA AAATGCCAAT TCTTCGAAAG TTTTTCTCAA TTGAAGAGCA GAATAATTGG
TTCGCTGCTT CAGATAAAAT TAACCTGGCT CCCTTTTTAT CTACAAAACT TATTACTAAA
AAATACCAGG GTATTGACTC CCCTCATGAT TATGGAGAAG TTCTGCATAC TGGTTATGTA
AAAACCGGGC AATTATTAGA AAGTTACAGA GAGTATCTAA AAAAGAATGA TTTACTTCTT
GAAGAATCTT TTCACAGCTC TTTTCTGGAA ATTCTTGATT CAGGAATTCA GTACAAAAGT
ATCAAAGCCC GTCATATCAT ATTTGCAGAA GGTTTTGGAC TGCATAAAAA CCCTTATTTT
AATTACCTGC CTTTGGATGG AACAAAAGGT GAACTGTTTT TAATAAAAGC GCCTGATTTA
AAACTAGATG TTATTGTTAA CACAAGTGTT TTTATTCTGC CTGTTGGAGG TAATTTATAT
AAAGTTGGTG CAACTTACAA TTGGCATGAT AAAACGGATC TCCCAACCGA AGAAGGAAAA
CAAGAGCTTA TAGATCGTAT TAAAGAAATT ATTACCTGCG ATTTTGAGAT CATAAAACAC
TTTGCCGGAG TAAGGCCAAC AGTTGCCGAC AGAAGACCTA TAATAGGAAC TCATGAGGCA
TACAAATCTA TTCATCTTCT TAACGGATTA GGAACACGCG GTGTAATGCT GGGACCGGCA
TTGGCAAAAA TGTTATATGA TAATATTGAA AATGGAACTC CAATAGACCG TGAAGCAGAT
ATAAAACGCT TCCATAAAAG ATATTTGAAA TCTCTTATTC CTGACCGGCC TTAG
 
Protein sequence
MLDYLIVGSG LAGISFAEIA LKNNKSILVV DDKSQNSSRI AGGLYNPVIL KRFSEVWNAK 
EHLVLMNEFY EQVEGKLQEK FNFKMPILRK FFSIEEQNNW FAASDKINLA PFLSTKLITK
KYQGIDSPHD YGEVLHTGYV KTGQLLESYR EYLKKNDLLL EESFHSSFLE ILDSGIQYKS
IKARHIIFAE GFGLHKNPYF NYLPLDGTKG ELFLIKAPDL KLDVIVNTSV FILPVGGNLY
KVGATYNWHD KTDLPTEEGK QELIDRIKEI ITCDFEIIKH FAGVRPTVAD RRPIIGTHEA
YKSIHLLNGL GTRGVMLGPA LAKMLYDNIE NGTPIDREAD IKRFHKRYLK SLIPDRP