| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1801 |
|---|
| Symbol | |
|---|
| ID | 5091868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2081974 |
|---|
| End bp | 2082738 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644741214 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001194152 |
|---|
| Protein GI | 146299561 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC ACTATAAAAA AGAAGGCAAA TACAGCTATT TTGAAGCAGG AGAAGGAACC
CCTATCGTTA TTTTGCATGG GTTAATGGGA GGTCTAAGTA ACTTTGATGG TGTAGCACAA
TATTTCCCAA CGAAAGGATA TAAAGTTGTT ATTCCGGATT TGCCAATATA CACACAAAGC
ATTTTAAAAA CGAACGTAAA AAGTTTTGCT AAATACGTTA AAGATTTCAT CACTTTTAAA
GGTTTCGACA AAGTAATTCT TCTTGGAAAT TCTCTAGGAG GGCATATTGC CTTGTATCAT
ACAAAGCTTT ATCCTGAAAA AGTTGCCGGA CTTGTAATTA CAGGAAGTTC AGGACTTTAT
GAAAGCGCAA TGGGAGACAG TTACCCTAGA AGAGGCGATT ATGAATACAT TAAAAAGAAA
GCTGAAGATG TATTTTATGA TCCAAAAATT GCAACTCCGG AGCTTATTGA TGAAGTATAT
GCGACCGCCA ATGACCGCAT AAAACTGATT AAAACTTTAA CAATTGCCAA GAGCGCAATT
CGTCATAATA TGGCCAAAGA TTTACCAAAA ATGACAGTTG ACACCTGCAT CATTTGGGGT
AAAAATGACT CAGTAACACC TCCAAATGTT GCTGAAGAAT TTGACAAATT ATTGCCTAAT
TCAAGTTTGT ACTGGATTGA CAAATGTGGA CACGCTGCTA TGATGGAGCA TCCTCAGGAA
TTTAATGAAA TTCTTGAGAA ATGGCTTACC GAAAAGAATT TATAG
|
|---|
| Protein sequence | MDKHYKKEGK YSYFEAGEGT PIVILHGLMG GLSNFDGVAQ YFPTKGYKVV IPDLPIYTQS
ILKTNVKSFA KYVKDFITFK GFDKVILLGN SLGGHIALYH TKLYPEKVAG LVITGSSGLY
ESAMGDSYPR RGDYEYIKKK AEDVFYDPKI ATPELIDEVY ATANDRIKLI KTLTIAKSAI
RHNMAKDLPK MTVDTCIIWG KNDSVTPPNV AEEFDKLLPN SSLYWIDKCG HAAMMEHPQE
FNEILEKWLT EKNL
|
|---|
| |