Gene Fjoh_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1721 
Symbol 
ID5093063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1994020 
End bp1994556 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content35% 
IMG OID644741130 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001194072 
Protein GI146299481 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAC TTGAGAATAG CGAATTAGAA AGAAAATCTA TTGAAGATTT TAAAAAATCA 
GACAAAACTC CTTTAATATT AGTTTTGGAT GACATTCGCA GCTTACATAA TATAGGATCT
GTTTTTAGAA CTTCTGATGC TTTTTTGGTT GAGAAGATAA TCTTATGCGG TATTACCGCA
ACACCGCCAA ACAAAGAAAT TCACAAAACT GCATTGGGCG CGACCGAAAC GGTTGCCTGG
GAACATCATG AAAATGTTTT GGAAGTTATT GAAAACCTAA AAAAAGAAAA TGTATTAACT
CTTGCTATTG AACAAGTTGA AAGCGCAGTT TTTCTTCAGG ATTTTCAGGT TGAAAAAAAT
CAGAAATACG CTCTTGTTTT TGGAAATGAA GTTTACGGCG TATCGCAGGA AGCAGTTGCC
ATTTGCGACG GATGTATCGA AATTCCTCAA TTAGGCACAA AACACTCTTT AAATATTGCT
GTCAGTGCAG GAATTGTAGT TTGGGATTTG TTTCAGAAAC TAAACTGGCC AAAATAA
 
Protein sequence
MRKLENSELE RKSIEDFKKS DKTPLILVLD DIRSLHNIGS VFRTSDAFLV EKIILCGITA 
TPPNKEIHKT ALGATETVAW EHHENVLEVI ENLKKENVLT LAIEQVESAV FLQDFQVEKN
QKYALVFGNE VYGVSQEAVA ICDGCIEIPQ LGTKHSLNIA VSAGIVVWDL FQKLNWPK