| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1715 |
|---|
| Symbol | |
|---|
| ID | 5093057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1983805 |
|---|
| End bp | 1984842 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644741124 |
|---|
| Product | ADP-heptose:LPS heptosyltransferase-like protein |
|---|
| Protein accession | YP_001194066 |
|---|
| Protein GI | 146299475 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGCT TGACTAAGAA TATTGGAAAA CCCAAAACAG AACGAGATAT TATTTTGGTT
GATAAAACTG AAATAAAACG AGTTTTAATC TGCAGACCCA ACGGAAGACT TGGTAATCTT
TTATTAATTA CACCGCTCGT TCAGGAAGTA GAGGAAATGT TTCCAAATTG TAAAATTGAT
TTATTTGTAA AAGGTGGATT AGCGCCAATT ATTTTCGAAA ATTATCCAGT CCTTAATAAA
ACAATCCATC TGCCTAAAAA ACCTTTTAAA AATTTAATCG AATATATTAA GGTTTGGATT
TCGATTACAA GTGAGCCTTA CGACATGGCA ATAAATGTCG ACCAAAATTC TTCTTCTGGA
AGATTAGCTG TAAAATTCTC AAGAGCAAGA TATAAATTTT ACGGAGATCT TGATGGTGAA
TTATCAGAAC CTAAAAATGA TTATGACCAT ATAGCTAAAT ATCCAGTTTA TAACTTTCGT
ACTTATTTAA CCAAACTTGG ACTTCCAAAA AGAAATAAGA TAATAGAATC TTTAGATCTT
AAACTTAATG TTGCAGAAAT TGCTAACGGA AAGAAAATTT TAGATCACAT AATTGATCCT
TCTAAACGAA CAATTTGTTT GTTTACTTAT GCTACCGGAG CAAAATGTTT TTCTGAAGAA
TGGTGGGAGA GTTTTTATTC TAAACTAAAA GCCGAATATA AAAATTATAA TATCATCGAA
ATATTACCAA TTGAGAATGT TTCTCAAATT GGATTTCAGG CTCCAACATA TTACAGTAAA
GATATTCGTG AAATGGGGTC AGTGCTGGCA AATGTAGATT TGTTTATTGG TGCAGACAGT
GGTATTATGC ACCTGGCGAG TTCTGTTCAA ACGCCTACGA TTGGTTTGTT CTCTGTTTCA
GAATTAAAAA AATATGAACC TTATGACAGC GGCAGTGTAG GAATAGATAC AAAAGAATGC
TTACAGCCGG AATATTTCAA AATTATTAAT TCAATTTTAG AAAACGGAAA ATTAAGAGTA
TATCCTAAAG CAGTATAA
|
|---|
| Protein sequence | MRGLTKNIGK PKTERDIILV DKTEIKRVLI CRPNGRLGNL LLITPLVQEV EEMFPNCKID
LFVKGGLAPI IFENYPVLNK TIHLPKKPFK NLIEYIKVWI SITSEPYDMA INVDQNSSSG
RLAVKFSRAR YKFYGDLDGE LSEPKNDYDH IAKYPVYNFR TYLTKLGLPK RNKIIESLDL
KLNVAEIANG KKILDHIIDP SKRTICLFTY ATGAKCFSEE WWESFYSKLK AEYKNYNIIE
ILPIENVSQI GFQAPTYYSK DIREMGSVLA NVDLFIGADS GIMHLASSVQ TPTIGLFSVS
ELKKYEPYDS GSVGIDTKEC LQPEYFKIIN SILENGKLRV YPKAV
|
|---|
| |