| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1548 |
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| Symbol | |
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| ID | 5092652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1785791 |
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| End bp | 1788550 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644740955 |
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| Product | AsmA family protein |
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| Protein accession | YP_001193899 |
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| Protein GI | 146299308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0338649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA GTAAATCCAG GTCAATCGTA TTTAAAATTG CGAAGTATTT AGGGATAACT
TTCGCTGTTA TTTTAGCACT ATTATTTTTA ACGCCAATTG TTTTTGAAGA TCAAATTAAA
GAACAGATCA AAAAAACAGC CAACGAAAGA CTGAGCGCAG AACTTAATTA TTCTGATGTT
TCCGTTTCGT TTTTTCGTCA TTTTCCATCA CTGACTTTAA CCTTAGATAA TTTAAGCCTT
AATGGTTCTG CGCCATACAA AAACGAAAAA TTTATTACCG CAAAAGAGGT TTCTTTTGGG
ATAAATGTCG CGAGTTTAAT TTTCAGCAAA TCGGTAAAAA TTGACCAGAT TTATTTATCT
GATTCTTTTA TAAATGTAAA AGTGAATCCA AACGGACAAG CCAATTATAA CATTTATAAA
TCACAAGCCA AAGCCGCAGA AACCAAAGAC AGTACTGATA CCGCATTAAA ACTGGAGCGA
ATTGAGATTT TAAACAGTAA AATTATTTAC GACGATCAGT CAACAAAGGT ACATTTTGAT
GCGTTTGGTT TTAATTATTT AGGAAAAGGC GATTTAAACA AAGCCGTTTT CGATTTATAC
TCAAAAGCTA AAATTGAAAA ATTAAATATT GTTTATGAAA ACGAACCGTA TTTAATGAAT
AAAAAAGTAG ATGCTGACTT AATTACAAAA GTCAACATCA ACTCCCTTTC TTTCTTCTTC
CAGCAAAACA ACTTAAAAAT CAACCAGCTT TTGGTCGATT TTAAAGGAAA ATTCGACATT
TTGAAAGACG GGTATAATAT GGATTTTGTT ATAAAATCTG ACAACAGCGA TTTGTATGAT
GTATTTACAG CTTTTCCGCC AAAATACATT ACATGGCTTT CTAAAACAGA ATTAAAAGGA
AATACAAACC TTCTTTTAAC ACTAAAAGGA AATTACATCA CATCTCAAAA TATTGCTCCG
GATTTGAATC TGGATGTCAA AATTGACAAT GGATTTGTAA ATTATAATAA AAGCGCCTTC
CCGGTTTCTA ATTTAAATTT AGACATTAAA ACAAAAGTTC CGTCTTTAAA TCCGGATCTT
TTAACGGTTG ATGCTAAAAA CCTGTCTTTA AATATCAATC AGGATTATTT AAAATCCAAA
TTCTTTGTAA AAGGTATAAA CACACCTGAA ATCAATGCTG ATTTTAAAGC TAAAATTAAT
CTCGAAAAAC TAACAAAAGC ATTCGGTATT CCAGATATTG AATTAAAAGG ATCTTTGGCC
GGAGATATTC AGGCGAATGG AAAATTCGAC CAAAAAAACA AACTTTTCCC GGTTACCAAA
GGAGTTTTTG ACTTAGAAAA CGGTTATCTG AAAACAAAAT ATTATCCAAA CCCTATTACC
AATATTACTA TTAAATCTAA AATCGATAAC CAAAAGGGAA CTTTTGAAGA TTTAAAAATC
AAACTAAAAC CAGCTCAGTT TACTTTTGAA GGAAAACCTG TTTTTGTAGA AGCCGATTTG
AGTGATTTTA ATGATTTAGC ATACGATATT AAGGCAAAAG GAGAATTGGA CGTTAACCGA
ATTTATAAAG TTTTCTCTCG AAAAGGACTT GATTTAGATG GTTTCATTAA AGCCGATTTA
GTTTTAAAAG GAAAACAAAG CGATGCCGAA AAAGGAAATT ACAGCAAATT ATACAATAAA
GGAACGCTTG AGCTGCGAAA TATTGGCGTA GCATCTGAAT ATCTTCCTAA AAAATTCATT
ATCAAAGAAG GTATTTTCAA AATCAATCAG GATAAAATGT CTTTTAATAA TTTCCTGGCT
GCATACGGAC AATCTGATTT TAAAATGAAT GGTTATTTAC AAAATGTTTT TAACTATGCA
ACCACAAATA CAGGTGTTTT AAAAGGCTCT TTTAAAGTTT CGGCGCGATA TATCAATGTA
GATGAATTCA TGTCGCAGAC ATCAGCAAAT ACTTCGGTAA CAAAAACTCC AGCTCCAAAA
ACAGAAACAA AAACCGAACC TGAGCAAACT GGCGTTATTA TTATCCCAAC AAACCTGAAT
CTGCAATTAT TAGCTAATGC TCAAAAAGTA AATTTTGACA AGCTGAACCT TCAAAATGCA
ACCGGCTATT TAACCATGAA CAAAGGTAAA TTAACGATGC AGAATACTGG TTTTAATTTA
ATTGGCTGTA ATGTGGCTAT GAATGCCAAT TATCAGGCCG TAACGCCGCA AAAAGCAAAT
TTTGATTATG CTGTAAAAGC ATCAGATTTT GATATTAAGC GAGCTTACAA TGAAATTGAA
GTTTTTAGAA AAATGGCAAG TGCCGCAGAA AAAGCTCAGG GAATTGTTTC TTTAGATTAT
AAATTAAAAG GCCGTTTAAA CGGAAATATG GAACCGGTTT ATCCTTCACT TGTTGGCGGC
GGCGTACTTT CTGTAAAAGA TGTAAAAGTT CGCGGTTTGA AAATGTTTAA TGCTGTAAGC
AAACAAACAA GTTCTGAATC AATGAAAAAT CCTGATGTAT CAAAAGTAGA TATCAAAAGT
ACCGTTAAGA ACAATATCAT TACCGTAGAA CGCTTTAAAT TTAAATTTGC CGGCTTTAGA
CCCAGAATTG AAGGAACAAC AAGTTTAGAC GGAAAACTAA ACTTAAAAAT GCGTTTAGGA
CTTCCGCCGC TTGGTATATT TGGAATTCCG TTAACTGTTA CAGGAACACA GGACAATCCT
AAAGTAAAAG TAGGCCGTAA AACGGAAGAT CTGGAAGAAA CAAAAGATAC TGAAAATTAG
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| Protein sequence | MQKSKSRSIV FKIAKYLGIT FAVILALLFL TPIVFEDQIK EQIKKTANER LSAELNYSDV
SVSFFRHFPS LTLTLDNLSL NGSAPYKNEK FITAKEVSFG INVASLIFSK SVKIDQIYLS
DSFINVKVNP NGQANYNIYK SQAKAAETKD STDTALKLER IEILNSKIIY DDQSTKVHFD
AFGFNYLGKG DLNKAVFDLY SKAKIEKLNI VYENEPYLMN KKVDADLITK VNINSLSFFF
QQNNLKINQL LVDFKGKFDI LKDGYNMDFV IKSDNSDLYD VFTAFPPKYI TWLSKTELKG
NTNLLLTLKG NYITSQNIAP DLNLDVKIDN GFVNYNKSAF PVSNLNLDIK TKVPSLNPDL
LTVDAKNLSL NINQDYLKSK FFVKGINTPE INADFKAKIN LEKLTKAFGI PDIELKGSLA
GDIQANGKFD QKNKLFPVTK GVFDLENGYL KTKYYPNPIT NITIKSKIDN QKGTFEDLKI
KLKPAQFTFE GKPVFVEADL SDFNDLAYDI KAKGELDVNR IYKVFSRKGL DLDGFIKADL
VLKGKQSDAE KGNYSKLYNK GTLELRNIGV ASEYLPKKFI IKEGIFKINQ DKMSFNNFLA
AYGQSDFKMN GYLQNVFNYA TTNTGVLKGS FKVSARYINV DEFMSQTSAN TSVTKTPAPK
TETKTEPEQT GVIIIPTNLN LQLLANAQKV NFDKLNLQNA TGYLTMNKGK LTMQNTGFNL
IGCNVAMNAN YQAVTPQKAN FDYAVKASDF DIKRAYNEIE VFRKMASAAE KAQGIVSLDY
KLKGRLNGNM EPVYPSLVGG GVLSVKDVKV RGLKMFNAVS KQTSSESMKN PDVSKVDIKS
TVKNNIITVE RFKFKFAGFR PRIEGTTSLD GKLNLKMRLG LPPLGIFGIP LTVTGTQDNP
KVKVGRKTED LEETKDTEN
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