| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1363 |
|---|
| Symbol | |
|---|
| ID | 5092368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1558729 |
|---|
| End bp | 1559868 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 644740769 |
|---|
| Product | peptidase M56, BlaR1 |
|---|
| Protein accession | YP_001193714 |
|---|
| Protein GI | 146299123 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTT TTAACCGTGC CTATCTTATT GGAAGTTTGA TTTTTAGTTT TGTAATTCCG
CTGCAGCTGT TCTCAATAAA AACCACATTT GAAACGGGAA TAAACAATAT TCAATTAGAA
GGAATAGTGA TTCAAAAAGG ACGTGCTCCT TTAAATGAAA ATTACATCAT GTATACTATT
TTCTATTATT TAATTCGTGT TTATGTTATT GTTTCAATAG TGCTGGCTCT TCGTTTTGTT
TTAAACCTAA TTTCATTTTT TATAAAATTA AAAAGAAAAG AAATCTGCTT CGTAAATGGT
GTCAAAGTAG TTTTAACCAA TGAGGCAGTT TTACCTCACT CTTTTTGGAA TGCCATTTTT
GTCAATAAAA CAGATTTTGA AATGGGAAAA ATTCCATCAG AATTAATTGC ACACGAAAGG
GCGCATTTAG AACAGCGGCA TACTTTGGAT GTTCTTTTTG TTGAAGCACT GCAAATTGTA
TTTTGGGTTA ATCCGTTTTT TTCTCTTTTA AAAAAAGCAA TAAAGCTCAA TCATGAGTTT
TTGGCTGATG AAGCTGTAAA TAAACAGTTT AATTCGGTTT CAGATTATCA GAATTTATTA
CTTGATTTTG CTTCAAATAA AAATACGATT TCGCTTGCTA GTAATATTAA TTATTTAATA
ACTAAAAAAC GTTTACTTAT GATGACCAAA AAAGAAAATT CGACAAAAAT TGTTTTAAAA
ATGGGTTTTG CAACTGCGAT TTGCGGTTTA ATATTATTTA TTTTTTCTAC AAAAACTACA
GCTCAGACAA ACAGTTTAAA AGATCAAAAT GATTTTAAAG TTAGTTATGA TACTACTAGT
GTAAATGAGC CTCAATTTCC TGGCGGGATA ACAGAATTCT ATAAGTTTAT TGGTAAAAAT
TTTAAAATGC CTGCAGAAGC TTCAAAAAAC AAAGTACAGG GAAAAGTATT AATGGAGTTT
ATGATTGAAA AAGACGGAAG TTTATCTGAA ATTAAAGTTA AAAAAGATTT GGGATATGGT
TTAGCCGAGG AAGCCGTTAG AGTTTTAAGA CTTTCTCCAA AATGGATTCC CGCTACTGAA
AATGGAGAAC CGGTTCGTGT AAGTTATGGA TTGCCAATTA CTATTCAAAG TGAGAAGTAG
|
|---|
| Protein sequence | MFRFNRAYLI GSLIFSFVIP LQLFSIKTTF ETGINNIQLE GIVIQKGRAP LNENYIMYTI
FYYLIRVYVI VSIVLALRFV LNLISFFIKL KRKEICFVNG VKVVLTNEAV LPHSFWNAIF
VNKTDFEMGK IPSELIAHER AHLEQRHTLD VLFVEALQIV FWVNPFFSLL KKAIKLNHEF
LADEAVNKQF NSVSDYQNLL LDFASNKNTI SLASNINYLI TKKRLLMMTK KENSTKIVLK
MGFATAICGL ILFIFSTKTT AQTNSLKDQN DFKVSYDTTS VNEPQFPGGI TEFYKFIGKN
FKMPAEASKN KVQGKVLMEF MIEKDGSLSE IKVKKDLGYG LAEEAVRVLR LSPKWIPATE
NGEPVRVSYG LPITIQSEK
|
|---|
| |