| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1342 |
|---|
| Symbol | |
|---|
| ID | 5092347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1533528 |
|---|
| End bp | 1535990 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 820 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740745 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001193693 |
|---|
| Protein GI | 146299102 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.046701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA CTTTACTCAA AATAAAAAAC TATTTCCAAT CGGTTCATTT TAAAAAATAC
GCCAAACGTT TTGGTATTTT TATTTTGGTC CTTATTGGAC TGCTTTTATT GGCTTGCGGA
GGATTATCGA TTTACTTCAA TCAAAACAAA ACCGAAATTA TCGCCAAGAT CAATACCAAA
ATCAACGAAA ACATAAATGG AAAGTTCCAT ATTGGCGATT TTCACTATAA GTTTTTAACA
GGTTTCCCAA ATTTCACATT GGCTTTAAAA GATGTCGAGC TCAAAGACAA CAAATGGAAT
ACACATCATC ATACTTTACT GAAAGCACAG GAAATCGAAG CGCGTTTAAA TGTTTGGAGT
TTATTACAAA AAGAAGTCAA CATTCATAAA ATCCTGATTA ATGACGCCGA TATTTACATT
TACAAAACCA AAGACGGCTA CACAAACTCG GATATTTTTA AACCGAAAAA GAAAAAAACA
CCCGAAAGCA AATCAAAACC CGAAACTACA ATTGACGAAA TCGACCTGAG CGATGTGCAT
GTTATTATAG ATAATCAATT GGGAAATAAA TTATTTGATT TTGATGTTCA CAGTTTAAAA
TCAAAAGTAG ATTACGACGG AGACAACTGG AATACTGATT TGTTTCTCTA CACCCAAATT
AAAAGTCTGG CTTTTAATAC CGTTCACGGA AGTTTCGCCA AAGAAAAAGA ACTCAAAGGA
ACACTTTCTG TTACGTACCA TGCCGACAAA CAAAAAATTG ATGTTTCGAC TAAAAACCTA
AAAATTGGTT CTGACTCTTT TGATATCGCG GCGTATTTCA ATATTGGCAA AACCAATTCC
CTTTTCGGAA TCAATATTAA TACGCGTATT TTATGGAGTA ACGCTTCTAA TTTATTGTCT
GGAAATATCA GCTCAAAACT GAATCGGTTT GATTTAAAGA AACCAATCGA TGTAAACTGC
GATCTAAAAG GCGATTTAAA CGTTCATGAC GATCCTAAAA TTGTGGTTCA GGCCGTAGCC
AAAAACAACG AACTTACGAT TCCCGACGGG CAAATTGACA AATGTAATTT CAGAGGAATT
TTTACCAATA ATTTCAAACC AAAAGACGGA TTTAATGATC CAAATTCGGC TGTAATTTTA
ACCCGATTTT CAGGAGAATA CGAAAACATT CCGCTTACCA TTCCGCAAGT TGTAATCAGC
AATCTCGAAA AACCAATTGC AACCGGAAAC GTAAGTTCTG ATTTTGATAT CGAAAGACTC
AACCAGGTAA GCAACGAAAA GTGGATTCAT TTTGAAGATG GCCACGCCAA GGCCAATTTG
AAATTTCAGT TTGACATTGT CGATTTGTAC ATTACTAAAC CAAGATTTAT AGGAAATATT
GACATTGATG ACGCTTCGTT TCATTATATC CCAAAAAATA TTCAGGCTGT AAAAACCAAT
ATTCACCTCA ATTTTACCGA AAAAGCCTTA ATCATCAAAC AAATTGCCTA CAAACATAAA
AAGAATACCA TTTTTATAGA CGGAAAAATC GATAATTTCC TAAACCTCTA TTACGACGCA
CCCGAAAAAA TGGTCGTAAA CTGGAATATT TATTGCCCGA ATATCGATCT TAAACAATTT
CTGGGCGTTT TGGCTTCTTC ACAAAAAAAG AAAGCAGCAA TTAAAAACAA TAAAAGAACT
ACGATTTCCA GCCATTTGCG AAACGTAATC GAAAATTGTG TTGTGGTAAT AGACATTAAA
GCAGATAAAA TCAATTATAA TAAACTTACC GCTACCAATA CCAAAGCAAC AATCTCAATG
CTGAATTCTA AATTGGTTAT AAAAAATGGT TCACTCCAAA CTTCTGGCGG AAATATTACT
TTTAACAGCG AAGTTTTGCC AAGCGGAAAA AACTACGCTT TTAGCTCAAA CGCGCAGGTA
AACCGAGTTG ATATTGCGAG CTTTTTAAGA TCGTTCAACA ACTTCGGAAT CACTTCTTTT
AATCCGAATA ACATAAAAGG AAAATTAACC AGCACCGCAA ACGTAAGCGG TTTTATAAAC
AGTCAAGGCG AATTAATTAC CAACTCCATG CACGGAAAGC TCGATTTTAA AGTTAATCAA
GGCGCATTGC TCAACTTTGA ACCTATTGTA AAAGTGGGCA AATTTGCTTT TCCGTTTCGT
GATGTCAATA ATATTACTTT CAGTGATTTG TCTGGTCATT TAAATATGCG CGGTGAACAA
ATAGACGTAA ATAATTTAAC CATAAGTTCC AGCGTTCTAA ATATTGATGT TGACGGAATT
TATTCTTTTG GCCGAGGCAC CAATCTCGCC CTGACAATCC CTCTAAGAAA TTCTAAAAAC
GACGCCAAAC TAGCCAGCAA AGCCGAACGC GATGCCGTGC GCGAACGTGG TATTGTACTG
CACTTATTGG CTGTTGATGA TGAAGGGAAA ATGAAAATTA AGTGGGGAAA GAAAGATAAG
TAA
|
|---|
| Protein sequence | MKETLLKIKN YFQSVHFKKY AKRFGIFILV LIGLLLLACG GLSIYFNQNK TEIIAKINTK
INENINGKFH IGDFHYKFLT GFPNFTLALK DVELKDNKWN THHHTLLKAQ EIEARLNVWS
LLQKEVNIHK ILINDADIYI YKTKDGYTNS DIFKPKKKKT PESKSKPETT IDEIDLSDVH
VIIDNQLGNK LFDFDVHSLK SKVDYDGDNW NTDLFLYTQI KSLAFNTVHG SFAKEKELKG
TLSVTYHADK QKIDVSTKNL KIGSDSFDIA AYFNIGKTNS LFGININTRI LWSNASNLLS
GNISSKLNRF DLKKPIDVNC DLKGDLNVHD DPKIVVQAVA KNNELTIPDG QIDKCNFRGI
FTNNFKPKDG FNDPNSAVIL TRFSGEYENI PLTIPQVVIS NLEKPIATGN VSSDFDIERL
NQVSNEKWIH FEDGHAKANL KFQFDIVDLY ITKPRFIGNI DIDDASFHYI PKNIQAVKTN
IHLNFTEKAL IIKQIAYKHK KNTIFIDGKI DNFLNLYYDA PEKMVVNWNI YCPNIDLKQF
LGVLASSQKK KAAIKNNKRT TISSHLRNVI ENCVVVIDIK ADKINYNKLT ATNTKATISM
LNSKLVIKNG SLQTSGGNIT FNSEVLPSGK NYAFSSNAQV NRVDIASFLR SFNNFGITSF
NPNNIKGKLT STANVSGFIN SQGELITNSM HGKLDFKVNQ GALLNFEPIV KVGKFAFPFR
DVNNITFSDL SGHLNMRGEQ IDVNNLTISS SVLNIDVDGI YSFGRGTNLA LTIPLRNSKN
DAKLASKAER DAVRERGIVL HLLAVDDEGK MKIKWGKKDK
|
|---|
| |