Gene Fjoh_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1337 
Symbol 
ID5092342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1529081 
End bp1530463 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content40% 
IMG OID644740740 
Productammonium transporter 
Protein accessionYP_001193688 
Protein GI146299097 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG AAAAACGCTG GATCATTTCC TTTATTATGA TAAGTGTCGT TTGCACGATA 
GGTGCATTTT GGCCAACGGT GACTGAAAAT AATTATGTTT TATCTGAATT TGGAACTACA
GACCACATTG TACCTGCCGA TGTTGCCTGG ATGCTTACGT CGAGCTGTCT GGTTTTAATC
ATGACGCCGG GATTGTCTTT CTTTTACGGC GGAATGGTAG GCAGAAAGAA TGTTATTTCT
ACCATGCTTC AAAGTTTTAT CTGTCTGGGC GTTGTAACAC TTTTATGGGT TGTTGTCGCT
TTTAGTCTTG CTTTTGGAGA ACCGGTTGGT TTTGGTTCTG GAGATCATTT TTACAGCTTT
TTTGGAAATC CTGCTACTTT TGCCTTTATG GATTATGTTG GCGTTCTGCC TCATAAACAA
TTGGCAAGTA CGATTCCGTT TATGCTTTTT GCTTTGTTCC AGATGAAATT TGCCATTATA
TGTCCGGCAA TTATCACGGG TTCATTTGCA GAACGTGTTC GTTTTATCTC TTATTTAGTT
TTCATCAGCT TATTTACCAT TTTTATATAT GCTCCTTTAT GTCACGCCGT TTGGTATCCA
ACGGGTGTTT TAGGAAGTTA TTTTGGCGTA AAAGATTTTG CCGGAGGAAC TGTAGTACAC
ATGAGTTCTG GTTTTGCTGC TTTGGCAGGA GTTATTGTTT TAGGTAAAAG AAAAAACAGC
CAGCACATTC CAACCAATAT TCCGTTTGTA TTATTAGGAA CAGGAATGTT ATGGTTTGGA
TGGTTTGGTT TCAACGCCGG ATCTGCTCTT GCCGCTAACG GAACTGCTGC AATGGCTTTT
GCTACTACCA CTACTTCATC TGCCGCTGCA ATGTTAACCT GGATTTTCTT TGACAGAATG
AACGGAAGAA AAGTTTCGGC TCTTGGCGCT TGTATTGGTG CTGTTGTGGG TCTGGTTGCT
ATTACTCCGG CTGCAGGATT TGTTTCTGTG CCAGAAAGTA TGTTCTTCGG ATTTGTAACG
GCTTTGGTTT CAAACACAGC TGTAAATTGT AAATACTCTA AAAGATTTGA TGATACGCTT
GATGTTTTTG CGTGTCACGG TGTCGGCGGA ATTATGGGAA TGATTTTAAC TGCTATTTTT
GCTCATGGCG AAAATGCAAG TTTACTGCAC GGAGGCTGGA ATGTTTTCGG ACATCACATG
ATGGCGCTTG TTTTGGTTTC TGTATTTACT TTCTTCGGAG CTTATTTCTT GTTTAAAGTA
ACCAATTTTA TTATTCCTTT GAGAGTTTCA GAAGAATCTG AACATATCGG ATTGGATTTA
TCACAGCACG ATGAAACCCT TGATCCAAAA TTAAAACCAA TTACTGAACC GCATTACGGT
TAA
 
Protein sequence
MKIEKRWIIS FIMISVVCTI GAFWPTVTEN NYVLSEFGTT DHIVPADVAW MLTSSCLVLI 
MTPGLSFFYG GMVGRKNVIS TMLQSFICLG VVTLLWVVVA FSLAFGEPVG FGSGDHFYSF
FGNPATFAFM DYVGVLPHKQ LASTIPFMLF ALFQMKFAII CPAIITGSFA ERVRFISYLV
FISLFTIFIY APLCHAVWYP TGVLGSYFGV KDFAGGTVVH MSSGFAALAG VIVLGKRKNS
QHIPTNIPFV LLGTGMLWFG WFGFNAGSAL AANGTAAMAF ATTTTSSAAA MLTWIFFDRM
NGRKVSALGA CIGAVVGLVA ITPAAGFVSV PESMFFGFVT ALVSNTAVNC KYSKRFDDTL
DVFACHGVGG IMGMILTAIF AHGENASLLH GGWNVFGHHM MALVLVSVFT FFGAYFLFKV
TNFIIPLRVS EESEHIGLDL SQHDETLDPK LKPITEPHYG