| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1318 |
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| Symbol | |
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| ID | 5092323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1508552 |
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| End bp | 1511020 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644740721 |
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| Product | putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase |
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| Protein accession | YP_001193669 |
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| Protein GI | 146299078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase
[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA ATTTAAAAAG CCTGATTCCG GTTTTAAATG CCGAGTGGAC AGGCTCAGAT
ACTGATATTT TTGTAGATCA TATTTCGATC GACAGCCGTT CTTTACAAAA CGGACCTCAA
ACATTGTTTA TTGCTCTTTC GGGCGCGAAT AATGACGCTC ATTTATATAT TGCCGAATTA
ATAGAAAAAG GCGTTCAGAA TTTTGCAGTT CAGTATATAC CAGAAAATGT AAAAGGAAAA
GCCAATTTTT TTGTTGTAAA AAATACGCTG AAAGCATTAC AGGAATTAGC AGCCTATTAT
CGTGATTTAT TCGATTTCCC TATTATTGGT TTAACCGGAA GCAACGGAAA AACCATCGTA
AAAGAATGGC TTAATTTTCT TTTAAGCCCT GATTATAATA TTATCCGAAG CCCAAAAAGT
TATAACTCAC AAGTTGGTGT TCCGCTTTCT GTTATTGCTA TAAATGAAAA ACACAATTTA
GGAATTTTTG AAGCCGGAAT TTCAACGGTT AACGAAATGG TTAATCTTGA GAAAATTATC
AAACCAAATA TTGGAGTTTT AACCAATATA GGTTCTGCAC ACGATGAAGG ATTTGAAAAT
CTGACTCAGA AAATCAACGA GAAATTACTG CTTTTCAAAA AGTCAGCAGT AATTATTTAT
CAAAAAAATG AATTGGTAGA TAAATGTCTT TTAGACTTTT CTGCTCAATA TCCGCTAGAA
AACAGAGCCT TATTTTCATG GAGTTTTGCA GATGCCTCTG CAGATGTTTT TATTCTGAAA
AAAGAAACCA AAAACGATTC AACCACAATA AAATATCAAT ATAAAGACGA AATTTTTAAT
TTAGAAATTC CGTTCAGCGA TTCTGCTTCT ATCGAAAATG CCATTTCATG TTTATTGGTT
TTACTGCATT TTGAATATGA TTTTACCATT ATTCAAAACA GAATGGAAAT GCTTTATCCA
GTTGAAATGC GTCTTGAAGT TAAAAACGGA ATCCACAATT GCAGTTTAAT AGACGATAGT
TACAGCTCCG ATTTTCAATC GCTGAAAATC GCTTTAGATT TTCTGGAAAG CCAGAAAAAA
AATGCTTCAA AAGCCGTTAT ACTATCAGAT ATTTTTCAAA GCGGATTTTC AAATGAAGAA
CTGTATTCAA AAGTAGCGCA GTTAATTTCA GATAATAAAA TAAACCGTGT CATTGGAATT
GGAACTACAA TTTCATCTTT TCAAGATAAG TTTCCAAACA GTACGATGTT TCAAAACACG
GCTGCATTTA TCGCCGAAAT TGAAAATTTG AATTTCAATA ATGAAACCAT ATTGATAAAA
GGCGCAAGAT CATTTCAGTT TGAAGAAATT GTTTCACTGC TTGAAGAAAA AACGCATGAA
ACAGTTCTCG AAATCAATCT GGATGCTATA AATCACAATC TGAATTATTT TAAATCAAAA
CTGGCCGATG ATGTAAAAAT CATGGTTATG GTCAAGGCTT TTGGTTATGG AAACGGCGGA
CTCGAAATTG CAAAACTGCT CGAACATAAT AAAGTAAATT ATTTAGGTGT GGCTTTCGCC
GATGAAGGAA TTTCGCTGAA AAATGGCGGC ATCAAACTGC CTATTATGGT TTTGAATCCA
GAATCGACCA GCTTTCCTTC GATAATTCAA TACAAACTTG AACCCGAAAT TTACAGCATA
AAAGGTTTAA ATGCCTTTTT GAAAATAGCC AGAGAAAAGA ACTTAAAAGA TTTTCCTATT
CATATAAAAG TCGATACAGG AATGCACCGT TTAGGTTTTG AGGATAATAC GATCGACGAA
TTAATTGCGA CTTTAAAAGG AAACTCAACC GTTCGTGTTC AAAGTATTTT ATCGCATTTG
GCAACGAGCG ATGATCCGAA GCATTTTGAT TTTGTAGAAA AACAAATAAG TTTATTCGAA
AGGTTATCTT CAAAATTAAT CTCAGAATTA AATATAAATC CAATCCGCCA TATTTTAAAC
ACTTCCGGAA TCAGTAATTT CCCAGATGCA CAATACAATA TGGTGCGTTT AGGGATTGGT
TTGTATGGCG TTTCCAACGA TCCGGCCGAA CAGAAATATC TGGAAAACGT AGGCACCTTA
AAATCGATTA TTTCGCAGGT TCGAACTATT CCGGCAGGTG ACAGCGTTGG TTACGGACGC
CGTTTTATGG CAGATAAAGA AACAAAAATT GCAACCATTC CAATTGGTTA TGCAGACGGA
ATTTCGAGAT TATGGGGCAA TCAGATTGGT TTTGTAACCA TCAAAAATCA AAAAGCCTAT
ATCGTAGGAA GTGTTTGTAT GGATATGTTA ATGGTTGATG TAAGTCATAT AGACTGCAAA
GAAGGCGATT CGGTAATTAT TTTCGGCGAA AGCCCAACGG TTATAGAAAT GGCTGAAGCA
TTAAAAACCA TTCCGTATGA AATAATGACC AGTATTTCGC AGCGTGTAAA ACGAGTATTT
TTTAGATAG
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| Protein sequence | MSINLKSLIP VLNAEWTGSD TDIFVDHISI DSRSLQNGPQ TLFIALSGAN NDAHLYIAEL
IEKGVQNFAV QYIPENVKGK ANFFVVKNTL KALQELAAYY RDLFDFPIIG LTGSNGKTIV
KEWLNFLLSP DYNIIRSPKS YNSQVGVPLS VIAINEKHNL GIFEAGISTV NEMVNLEKII
KPNIGVLTNI GSAHDEGFEN LTQKINEKLL LFKKSAVIIY QKNELVDKCL LDFSAQYPLE
NRALFSWSFA DASADVFILK KETKNDSTTI KYQYKDEIFN LEIPFSDSAS IENAISCLLV
LLHFEYDFTI IQNRMEMLYP VEMRLEVKNG IHNCSLIDDS YSSDFQSLKI ALDFLESQKK
NASKAVILSD IFQSGFSNEE LYSKVAQLIS DNKINRVIGI GTTISSFQDK FPNSTMFQNT
AAFIAEIENL NFNNETILIK GARSFQFEEI VSLLEEKTHE TVLEINLDAI NHNLNYFKSK
LADDVKIMVM VKAFGYGNGG LEIAKLLEHN KVNYLGVAFA DEGISLKNGG IKLPIMVLNP
ESTSFPSIIQ YKLEPEIYSI KGLNAFLKIA REKNLKDFPI HIKVDTGMHR LGFEDNTIDE
LIATLKGNST VRVQSILSHL ATSDDPKHFD FVEKQISLFE RLSSKLISEL NINPIRHILN
TSGISNFPDA QYNMVRLGIG LYGVSNDPAE QKYLENVGTL KSIISQVRTI PAGDSVGYGR
RFMADKETKI ATIPIGYADG ISRLWGNQIG FVTIKNQKAY IVGSVCMDML MVDVSHIDCK
EGDSVIIFGE SPTVIEMAEA LKTIPYEIMT SISQRVKRVF FR
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