Gene Fjoh_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1297 
Symbol 
ID5094001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1481112 
End bp1482407 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content33% 
IMG OID644740700 
Producthypothetical protein 
Protein accessionYP_001193648 
Protein GI146299057 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA ATAACGATAC GTTTGAATTA AGAAGTGAAG AAGTTCAGGA CATTCTCACC 
AAAGTGCCTC ATTGGATGAT ACGCTGGGGA ACAGTTATGA TTTTTGCGAT TATTGTCATA
CTCTTTTTTG TTTCATGGTT TATTAAATAT CCCGATGTTG TAAATACTGA AATTATAATT
ACAACCAATA TTCCGCCAGA GAAAATCGTA TCAAAATCAT CTGGAAGAAT TGAAGCAATT
TTGGTGAAAA ATAAAGCAAT AGTGTCTAAA AATAAAACAC TTGCAGTTAT AGAAAATACA
GCAAATTATA AAGATGTTTT TTTGCTGAAA AGTATAACCG ACAGTTACAA TATTAACGAT
CCGCAAGCCC AATTTCCGTT TTCGAAGTTA AAAAACACGC AGTTAGGCGA AATAGAAAGT
GCTTATGCTG TTTTTCAGAA AGATTACCAG GCGCAGCAAT TGAATCATGA TCTGCAGCCT
TTTGCTATAG AAAACAGAGC TCAGGTTTCA GAGAAAATTC AAATCAAAGA AAGGCTGGAA
ATTTTAGAAC AGCAAAAAGT AATTAATGAA AGCGAATTAC AGCTTCAGAA AAACGAGATT
GCCCGTTTTG AAGTTTTGTT CAACAAAGGA ATTATTTCGG CTCAGGAAAT GGAAGCAAAG
AAATTAGGTT TTCTTCAGGC GCAAAAGAGT TATAGAGGGC TTTTGTCGTC TATTTCCCAA
TTAAAGTCCT CACTTATTGA TAATACAAAA TCAAGTCAGA ATTCGCATAT AAACAGCACT
AAAGAGGAAG TTAACTTAGG AAGGAATATG GCACAGTCCT TTTTTCAGCT TAAAAAAGTT
ATAAAAGACT GGGAACTGGC TTATGCTTTA AAATCTTCAA TCAGCGGAAA AGTCACCTTT
TTGCAGATCT GGACAGAAAA CCAAACTATA AATTCCGGAG ATAATGTTTT TTCGATTATT
CCCGATGCTA AAAATGGTTT TATAGGAAAA GTAAAAGCGC CTGCATTAAA CTCAGGAAAA
ATAAAAATAG GGCAGAGGGT TAATATACGT CTGGCTAATT TTCCTGATAA GGAATTTGGT
GTTTTAAAAG GAAAAATTCA AAATATTTCT CTGGTTCCGG ATAAAGATGG AAATCTTCTT
ATAGATGTAG CTCTTCCAAA CGGTTTAAAA ACATCATACA ATAGACAAAT TACTTTTCAG
CAGGAAATGA AAGGAAGTGC AGAAATTGTA ACAGAAGATC TTCGATTAAT AGAAAGAATT
TTATATCAGT TTAAAAGTAT TTTTGAGCAG GTTTAG
 
Protein sequence
MAENNDTFEL RSEEVQDILT KVPHWMIRWG TVMIFAIIVI LFFVSWFIKY PDVVNTEIII 
TTNIPPEKIV SKSSGRIEAI LVKNKAIVSK NKTLAVIENT ANYKDVFLLK SITDSYNIND
PQAQFPFSKL KNTQLGEIES AYAVFQKDYQ AQQLNHDLQP FAIENRAQVS EKIQIKERLE
ILEQQKVINE SELQLQKNEI ARFEVLFNKG IISAQEMEAK KLGFLQAQKS YRGLLSSISQ
LKSSLIDNTK SSQNSHINST KEEVNLGRNM AQSFFQLKKV IKDWELAYAL KSSISGKVTF
LQIWTENQTI NSGDNVFSII PDAKNGFIGK VKAPALNSGK IKIGQRVNIR LANFPDKEFG
VLKGKIQNIS LVPDKDGNLL IDVALPNGLK TSYNRQITFQ QEMKGSAEIV TEDLRLIERI
LYQFKSIFEQ V