Gene Fjoh_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1229 
Symbol 
ID5090029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1401109 
End bp1401672 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content32% 
IMG OID644740631 
ProductLemA family protein 
Protein accessionYP_001193580 
Protein GI146298989 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0569306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTC AAAATATTGC ATTAATTGCC GGAATACTGC TTCTGATTAT ATTTTTTAAT 
TTATTTATCA GAATTTATAA TAAGCTGGTT ATGCTGAAAA ACAACTACGA AAAAGCCTTT
AGAAATATCG ATGTTATTTT GATGCAGAGA GCAGATGAAG TACCGGAGTT GGTAAAAATA
GTTTCTAAAT TTATGGAGCA CGAAACAGCA ATGCTCACTA GTTTGACTAA ATTAAGAACA
GATTTTCTAA ACTCAAAAAC AGTCGATGAA AAAATTGAAA ATGCGAATGA GTTTTCAAAA
GCAATGAAAA ATCTTTTTGC GGTTTCTGAA AATTATCCAA CTCTTGCTTC TAACGCTAAT
TTTTTGGAAT TACAAAAAAG AGTTTCGCAG ATGGAAGATA AAATTGCAGA CAGACGTGAG
TTTTTCAACG ACAGTGTTAA TCTTTACAAT GTAGGAATTC AGGAGTTTCC TAATTTTATT
CTGGCCAAAA TAGCCGGATA CAAAACACAA AGTTTATTTG ACGTTTCACC AGAGGAAAAA
AAATACGATG GGATTCAGCT TTAA
 
Protein sequence
MTVQNIALIA GILLLIIFFN LFIRIYNKLV MLKNNYEKAF RNIDVILMQR ADEVPELVKI 
VSKFMEHETA MLTSLTKLRT DFLNSKTVDE KIENANEFSK AMKNLFAVSE NYPTLASNAN
FLELQKRVSQ MEDKIADRRE FFNDSVNLYN VGIQEFPNFI LAKIAGYKTQ SLFDVSPEEK
KYDGIQL