Gene Fjoh_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1219 
Symbol 
ID5090019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1391851 
End bp1392924 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content34% 
IMG OID644740621 
Productbeta-lactamase 
Protein accessionYP_001193570 
Protein GI146298979 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.705817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATCATTTATT CTTATTGCTT TCTTTATTCT TCAGCTTCGC TTATTCGCAA 
AAGAACAATA GGTTTGTTGA CAGTATTCGA ATACAACATA ACATTCCAGA AGTGGCTTAT
GCAGTGGTTT CAGCTGATTC TATTTTAGAA ATAAGTGCAC TGGGAAATAA GAAAATTGGA
ACTGATTTAA AAGCCGATTT GTCGGATAAA TTCCGTTTGG GTTCTATCAC CAAAACAGTA
ACAAGTTATA TCGCGGCTGT TTTGGTTAAA GAAGGCAAAA TAAATTGGGA TACTAAGTTT
TTTGACTTAT ATCCTGAATT GAAATCAAAA AGCAATGCTG ATATTGATTT TACCTTAAAA
GATTTTATAA CTTTTAGAGC CCATATTCCA ACTTGGTCTT ATGGAAATGA AACTCCAACG
CAAAAAGAAA TAAAAGGAAA CGACCAGCAG CAGCGTTATG AGTTTATGGC GTGGTTTTTT
AAGCAGAATA AAATAATTTC TGAAAAACAG GAAGTATATT GGTCAAATCC CAGTTATGTT
GCCGCAGGAC TTATGCTCGA AAAAGCAACT GGCAAAAGTT ATGAAACACT GGTAAAAGAA
TTGGGAAGGA ATTTAAATAT TGATTTCGGG TTTGGCCAGC CAAATGTAAT GGATGTTAAC
CAGCCTTGGG GTCATGATGA AAACCTAAAG CCTGAAAAAC CAGCCTTAAA TTATAAATTA
AACTGGCTTT CATCTGCAGG AAATATAAAC GTCAGCCTGC CTGATTATTG TAAATTTACA
CAAATGCATT TACAGGGTTT ATTAGGAAAA TCAAAAGTAT TTTCAGCTTC TGAATTTGAT
ATGATACACA ATGGTTTACC TGAATTTTCG TTTGGATGGT ATTCTGAAAC TGATAAAAAA
ACGGGCATAA ATTATTCTTT TCATTATGGA AACCCGGGAA CTTTTTTAAC CAAAGTGTAT
ATTTGTAAAG CATCCAACAG AGCTTTTATC ATCTTTGCAA ATGTACAATC TGAGGAGGCA
GATAAAGGCT TAATGCTTAT CTTAGATGAA CTGAAAAGAA AATATAACGG CTGA
 
Protein sequence
MKKNHLFLLL SLFFSFAYSQ KNNRFVDSIR IQHNIPEVAY AVVSADSILE ISALGNKKIG 
TDLKADLSDK FRLGSITKTV TSYIAAVLVK EGKINWDTKF FDLYPELKSK SNADIDFTLK
DFITFRAHIP TWSYGNETPT QKEIKGNDQQ QRYEFMAWFF KQNKIISEKQ EVYWSNPSYV
AAGLMLEKAT GKSYETLVKE LGRNLNIDFG FGQPNVMDVN QPWGHDENLK PEKPALNYKL
NWLSSAGNIN VSLPDYCKFT QMHLQGLLGK SKVFSASEFD MIHNGLPEFS FGWYSETDKK
TGINYSFHYG NPGTFLTKVY ICKASNRAFI IFANVQSEEA DKGLMLILDE LKRKYNG