Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1219 |
Symbol | |
ID | 5090019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1391851 |
End bp | 1392924 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644740621 |
Product | beta-lactamase |
Protein accession | YP_001193570 |
Protein GI | 146298979 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.705817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA ATCATTTATT CTTATTGCTT TCTTTATTCT TCAGCTTCGC TTATTCGCAA AAGAACAATA GGTTTGTTGA CAGTATTCGA ATACAACATA ACATTCCAGA AGTGGCTTAT GCAGTGGTTT CAGCTGATTC TATTTTAGAA ATAAGTGCAC TGGGAAATAA GAAAATTGGA ACTGATTTAA AAGCCGATTT GTCGGATAAA TTCCGTTTGG GTTCTATCAC CAAAACAGTA ACAAGTTATA TCGCGGCTGT TTTGGTTAAA GAAGGCAAAA TAAATTGGGA TACTAAGTTT TTTGACTTAT ATCCTGAATT GAAATCAAAA AGCAATGCTG ATATTGATTT TACCTTAAAA GATTTTATAA CTTTTAGAGC CCATATTCCA ACTTGGTCTT ATGGAAATGA AACTCCAACG CAAAAAGAAA TAAAAGGAAA CGACCAGCAG CAGCGTTATG AGTTTATGGC GTGGTTTTTT AAGCAGAATA AAATAATTTC TGAAAAACAG GAAGTATATT GGTCAAATCC CAGTTATGTT GCCGCAGGAC TTATGCTCGA AAAAGCAACT GGCAAAAGTT ATGAAACACT GGTAAAAGAA TTGGGAAGGA ATTTAAATAT TGATTTCGGG TTTGGCCAGC CAAATGTAAT GGATGTTAAC CAGCCTTGGG GTCATGATGA AAACCTAAAG CCTGAAAAAC CAGCCTTAAA TTATAAATTA AACTGGCTTT CATCTGCAGG AAATATAAAC GTCAGCCTGC CTGATTATTG TAAATTTACA CAAATGCATT TACAGGGTTT ATTAGGAAAA TCAAAAGTAT TTTCAGCTTC TGAATTTGAT ATGATACACA ATGGTTTACC TGAATTTTCG TTTGGATGGT ATTCTGAAAC TGATAAAAAA ACGGGCATAA ATTATTCTTT TCATTATGGA AACCCGGGAA CTTTTTTAAC CAAAGTGTAT ATTTGTAAAG CATCCAACAG AGCTTTTATC ATCTTTGCAA ATGTACAATC TGAGGAGGCA GATAAAGGCT TAATGCTTAT CTTAGATGAA CTGAAAAGAA AATATAACGG CTGA
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Protein sequence | MKKNHLFLLL SLFFSFAYSQ KNNRFVDSIR IQHNIPEVAY AVVSADSILE ISALGNKKIG TDLKADLSDK FRLGSITKTV TSYIAAVLVK EGKINWDTKF FDLYPELKSK SNADIDFTLK DFITFRAHIP TWSYGNETPT QKEIKGNDQQ QRYEFMAWFF KQNKIISEKQ EVYWSNPSYV AAGLMLEKAT GKSYETLVKE LGRNLNIDFG FGQPNVMDVN QPWGHDENLK PEKPALNYKL NWLSSAGNIN VSLPDYCKFT QMHLQGLLGK SKVFSASEFD MIHNGLPEFS FGWYSETDKK TGINYSFHYG NPGTFLTKVY ICKASNRAFI IFANVQSEEA DKGLMLILDE LKRKYNG
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